C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008GT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs818 VISTA 9606 9:125458713-126060374
GeneTranscriptPositionBiotype
ENSG00000119487 (MAPKAP1)
mitogen-activated protein kinase associated protein 1 		ENST00000265960 (MAPKAP1-201) 125437394-125707234 protein_coding
ENST00000350766 (MAPKAP1-007) 125437394-125707203 protein_coding
ENST00000373496 (MAPKAP1-012) 125657669-125707198 protein_coding
ENST00000373498 (MAPKAP1-009) 125437394-125672643 protein_coding
ENST00000373503 (MAPKAP1-008) 125437394-125707212 protein_coding
ENST00000373511 (MAPKAP1-015) 125437393-125707231 protein_coding
ENST00000394060 (MAPKAP1-003) 125521468-125707231 protein_coding
ENST00000394063 (MAPKAP1-202) 125437394-125707234 protein_coding
ENST00000420643 (MAPKAP1-005) 125444501-125650417 protein_coding
ENST00000427078 (MAPKAP1-013) 125543059-125707177 protein_coding
ENST00000433483 (MAPKAP1-006) 125669887-125707202 protein_coding
ENST00000437973 (MAPKAP1-010) 125559114-125585627 processed_transcript
ENST00000444226 (MAPKAP1-004) 125438469-125484501 protein_coding
ENST00000448439 (MAPKAP1-011) 125565366-125669845 processed_transcript
ENST00000468896 (MAPKAP1-014) 125559783-125657710 protein_coding
ENST00000473837 (MAPKAP1-017) 125505944-125650461 retained_intron
ENST00000483937 (MAPKAP1-001) 125438469-125471905 processed_transcript
ENST00000496063 (MAPKAP1-018) 125438813-125506366 processed_transcript
ENST00000496658 (MAPKAP1-002) 125438707-125451101 processed_transcript
ENST00000497932 (MAPKAP1-016) 125438655-125595646 nonsense_mediated_decay
ENSG00000167081 (PBX3)
pre-B-cell leukemia homeobox 3 		ENST00000342287 (PBX3-001) 125747345-125967377 protein_coding
ENST00000373482 (PBX3-010) 125747454-125965990 nonsense_mediated_decay
ENST00000373487 (PBX3-007) 125747374-125967377 protein_coding
ENST00000373489 (PBX3-006) 125747438-125967377 protein_coding
ENST00000373492 (PBX3-005) 125747454-125965923 nonsense_mediated_decay
ENST00000428092 (PBX3-008) 125865271-125935531 protein_coding
ENST00000447726 (PBX3-002) 125748199-125967377 protein_coding
ENST00000491160 (PBX3-014) 125843735-125915869 processed_transcript
ENST00000491787 (PBX3-009) 125748182-125929845 protein_coding
ENST00000492314 (PBX3-004) 125748931-125749537 retained_intron
ENST00000497091 (PBX3-003) 125747374-125797465 processed_transcript
ENST00000538998 (PBX3-013) 125843713-125965940 processed_transcript
ENSG00000214761 (HNRNPA1P15)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 15 		ENST00000444886 (HNRNPA1P15-001) 125595669-125596628 processed_pseudogene
ENSG00000227068 (RP11-12A16.3)
 ENST00000437097 (RP11-12A16.3-001) 125567579-125573023 antisense
ENSG00000229582 (RP11-423C15.3)
 ENST00000444800 (RP11-423C15.3-002) 125743754-125745740 lincRNA
ENST00000606827 (RP11-423C15.3-001) 125744347-125746552 retained_intron
ENST00000614664 (RP11-423C15.3-201) 125744377-125746552 processed_transcript
ENSG00000243845 (RN7SL30P)
RNA, 7SL, cytoplasmic 30, pseudogene 		ENST00000488416 (RN7SL30P-201) 125512902-125513207 misc_RNA
CIL_0008GT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs818 VISTA 10090 2:34059231-34660874
GeneTranscriptPositionBiotype
ENSMUSG00000038696 (Mapkap1)
mitogen-activated protein kinase associated protein 1 		ENSMUST00000040459 (Mapkap1-002) 34406952-34623533 protein_coding
ENSMUST00000113123 (Mapkap1-005) 34406886-34623564 protein_coding
ENSMUST00000113124 (Mapkap1-004) 34406878-34623564 protein_coding
ENSMUST00000113126 (Mapkap1-201) 34432025-34624950 protein_coding
ENSMUST00000124443 (Mapkap1-003) 34406862-34623475 protein_coding
ENSMUST00000129633 (Mapkap1-011) 34619582-34623919 processed_transcript
ENSMUST00000137021 (Mapkap1-006) 34444347-34497873 processed_transcript
ENSMUST00000138933 (Mapkap1-009) 34438494-34533898 processed_transcript
ENSMUST00000141253 (Mapkap1-008) 34406869-34432132 processed_transcript
ENSMUST00000147337 (Mapkap1-001) 34407183-34624949 protein_coding
ENSMUST00000149383 (Mapkap1-007) 34406771-34444408 processed_transcript
ENSMUST00000156967 (Mapkap1-010) 34406872-34478768 processed_transcript
ENSMUSG00000038718 (Pbx3)
pre B cell leukemia homeobox 3 		ENSMUST00000040638 (Pbx3-001) 34171723-34372044 protein_coding
ENSMUST00000113132 (Pbx3-002) 34171457-34372038 protein_coding
ENSMUST00000127353 (Pbx3-008) 34224534-34371150 protein_coding
ENSMUST00000138021 (Pbx3-007) 34213400-34373142 protein_coding
ENSMUST00000141653 (Pbx3-009) 34224407-34371253 protein_coding
ENSMUST00000143776 (Pbx3-004) 34172881-34371920 nonsense_mediated_decay
ENSMUST00000153278 (Pbx3-003) 34172881-34371920 nonsense_mediated_decay
ENSMUST00000155423 (Pbx3-005) 34368112-34371792 retained_intron
ENSMUST00000175855 (Pbx3-006) 34176859-34370846 nonsense_mediated_decay
ENSMUST00000176213 (Pbx3-010) 34172873-34288852 processed_transcript
ENSMUSG00000081992 (Gm13408)
predicted gene 13408 		ENSMUST00000119822 (Gm13408-001) 34564999-34565796 processed_pseudogene
ENSMUSG00000083233 (Gm13406)
predicted gene 13406 		ENSMUST00000121991 (Gm13406-001) 34436327-34436582 processed_pseudogene
ENSMUSG00000083503 (Gm13407)
predicted gene 13407 		ENSMUST00000118256 (Gm13407-001) 34412988-34413347 processed_pseudogene
ENSMUSG00000084908 (C79798)
expressed sequence C79798 		ENSMUST00000131588 (C79798-001) 34287771-34304440 antisense
ENSMUSG00000087461 (C230014O12Rik)
RIKEN cDNA C230014O12 gene 		ENSMUST00000134921 (C230014O12Rik-001) 34018289-34107729 lincRNA
ENSMUST00000147871 (C230014O12Rik-003) 34097397-34111444 lincRNA
ENSMUST00000149707 (C230014O12Rik-002) 34100044-34107735 lincRNA
ENSMUSG00000087635 (Gm13414)
predicted gene 13414 		ENSMUST00000117516 (Gm13414-001) 34649514-34650240 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119487 ENST00000265960 9.994±0.00 9.851±0.00 N/A 9.587±0.00 16.439±0.00 9.891±0.00 9.820±6.06 6.467±5.25 5.213±2.20 N/A 4.366±2.71 N/A 5.212±2.01 11.162±0.00
ENST00000350766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.261±0.97 3.481±0.00 N/A
ENST00000373496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373498 N/A N/A 4.572±0.00 7.549±0.00 5.193±0.00 4.590±0.00 N/A 2.314±0.00 3.792±0.00 4.395±0.03 N/A 7.525±2.02 8.599±1.00 5.175±0.00
ENST00000373503 2.936±0.00 3.167±0.00 N/A 2.281±0.00 6.954±0.00 6.730±0.00 N/A 6.824±0.00 N/A 2.586±0.00 N/A 6.379±0.00 3.805±0.00 N/A
ENST00000373511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394060 N/A N/A 3.464±0.00 4.826±0.00 4.093±0.00 N/A N/A 4.742±0.00 4.210±0.00 N/A N/A 8.239±3.20 8.395±0.00 15.538±0.00
ENST00000394063 N/A 3.183±0.00 N/A N/A N/A N/A N/A 7.896±0.00 N/A N/A N/A 8.739±1.01 N/A 5.588±0.00
ENST00000420643 10.855±0.00 N/A N/A 8.606±0.00 17.771±0.00 13.717±0.00 22.289±0.00 N/A 10.670±0.00 11.380±0.00 13.468±0.00 N/A N/A 21.237±0.00
ENST00000427078 N/A N/A N/A N/A N/A 10.420±0.00 N/A N/A N/A N/A 13.619±0.00 N/A N/A N/A
ENST00000433483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448439 N/A N/A N/A N/A 13.379±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.559±0.00 N/A N/A N/A
ENST00000496063 N/A N/A 6.811±0.00 N/A N/A N/A N/A N/A N/A N/A 12.153±0.00 13.986±0.00 13.702±0.00 19.366±0.00
ENST00000496658 N/A N/A N/A N/A N/A N/A N/A N/A 23.479±0.00 N/A N/A N/A N/A N/A
ENST00000497932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167081 ENST00000342287 0.821±0.00 0.746±0.00 0.920±0.00 N/A 1.904±0.16 5.286±0.00 3.593±2.94 1.296±0.93 1.499±0.00 1.233±0.00 0.598±0.00 5.311±6.13 1.585±0.74 1.588±0.00
ENST00000373482 N/A N/A N/A N/A 1.489±0.00 N/A N/A N/A 1.730±0.00 N/A N/A N/A N/A N/A
ENST00000373487 N/A N/A N/A N/A N/A N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A
ENST00000373489 1.627±0.00 0.823±0.00 N/A 0.242±0.00 N/A 7.939±0.00 6.304±3.40 N/A 0.916±0.00 2.470±0.00 3.324±0.00 7.463±7.89 0.956±0.65 3.261±1.26
ENST00000373492 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.774±0.72 0.488±0.00 N/A N/A N/A
ENST00000428092 N/A N/A N/A 1.622±0.00 5.426±0.00 N/A N/A N/A 4.175±0.00 3.270±0.00 N/A N/A N/A N/A
ENST00000447726 N/A N/A N/A 0.252±0.00 N/A N/A N/A N/A 0.856±0.00 1.636±0.00 N/A N/A N/A N/A
ENST00000491160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491787 N/A N/A N/A N/A N/A N/A N/A N/A 3.783±0.00 N/A N/A N/A N/A N/A
ENST00000492314 0.083±0.00 0.126±0.00 0.790±0.00 0.248±0.12 0.636±0.36 0.323±0.24 0.084±0.02 0.643±0.58 1.005±0.00 1.184±1.00 0.130±0.00 0.739±0.41 0.096±0.03 1.605±1.23
ENST00000497091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.072±0.00 N/A N/A
ENST00000538998 1.419±0.00 N/A N/A N/A N/A N/A 2.518±0.00 0.812±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000214761 ENST00000444886 0.028±0.00 0.121±0.00 N/A N/A 0.322±0.00 0.054±0.01 0.104±0.00 0.089±0.05 0.284±0.00 0.671±0.00 N/A 0.132±0.12 0.097±0.00 21.944±14.82
ENSG00000227068 ENST00000437097 0.023±0.00 0.091±0.00 0.446±0.00 0.300±0.14 0.682±0.52 0.483±0.00 N/A 0.206±0.00 0.020±0.00 0.356±0.00 N/A 0.572±0.54 2.818±1.97 0.122±0.07
ENSG00000229582 ENST00000444800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 0.872±0.06
ENST00000606827 N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.002±0.00 N/A N/A 0.147±0.00 N/A 0.865±0.00
ENST00000614664 0.095±0.00 0.068±0.00 N/A 0.096±0.00 0.054±0.00 N/A 0.045±0.00 0.054±0.00 0.021±0.00 0.029±0.00 0.083±0.00 0.038±0.01 0.026±0.00 0.429±0.00
ENSG00000243845 ENST00000488416 N/A N/A N/A N/A N/A N/A N/A 2.943±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038696 ENSMUST00000040459 10.751±0.88 11.274±2.51 6.840±0.50 5.771±0.00 7.168±2.19 8.802±1.31 3.646±0.58 9.257±1.12 3.794±0.83 7.055±1.26 8.156±0.93 7.433±1.90 7.955±2.22 14.500±1.79
ENSMUST00000113123 N/A N/A N/A N/A 4.914±0.00 N/A 5.966±1.50 7.224±0.50 N/A N/A 2.676±0.45 N/A N/A N/A
ENSMUST00000113124 N/A N/A N/A N/A 4.628±0.00 N/A N/A N/A N/A 5.303±0.00 N/A N/A N/A N/A
ENSMUST00000113126 9.262±0.30 10.842±0.68 6.257±0.21 10.954±6.57 6.687±1.60 10.092±1.49 4.842±0.76 12.362±1.22 5.656±1.72 9.508±0.44 2.326±0.28 10.013±3.92 6.397±2.69 5.797±0.48
ENSMUST00000124443 5.925±0.20 7.173±1.52 N/A N/A 6.061±0.67 6.638±1.43 N/A 7.517±1.31 3.773±0.74 8.187±0.00 3.387±0.00 7.772±0.00 4.864±1.12 8.609±2.04
ENSMUST00000129633 N/A N/A N/A 13.838±0.00 N/A N/A N/A N/A N/A N/A 9.069±2.05 14.754±0.00 16.134±1.88 20.990±2.87
ENSMUST00000137021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147337 N/A N/A 7.431±1.78 5.676±1.45 N/A N/A N/A N/A 4.765±0.92 N/A 1.866±0.00 2.360±0.00 2.548±0.00 N/A
ENSMUST00000149383 N/A N/A N/A 8.556±0.00 N/A N/A N/A N/A N/A N/A N/A 10.012±0.00 18.821±0.64 27.105±0.00
ENSMUST00000156967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038718 ENSMUST00000040638 1.910±0.30 21.974±1.24 4.560±0.34 15.548±13.43 1.103±0.51 3.897±1.40 1.643±0.27 1.674±0.65 1.977±1.95 4.461±1.42 0.222±0.07 3.644±2.03 0.536±0.09 2.028±0.36
ENSMUST00000113132 0.784±0.50 17.744±0.00 1.727±0.52 22.387±16.78 0.215±0.00 3.087±0.00 0.652±0.10 1.274±0.49 1.364±1.26 1.653±0.80 0.358±0.13 2.953±0.98 0.854±0.43 0.583±0.15
ENSMUST00000127353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143776 N/A N/A N/A N/A 1.271±0.00 N/A N/A N/A 0.407±0.00 N/A N/A N/A N/A 1.015±0.59
ENSMUST00000153278 N/A N/A N/A N/A N/A N/A N/A N/A 0.404±0.00 N/A N/A N/A N/A N/A
ENSMUST00000155423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176213 N/A N/A N/A 1.844±0.00 N/A N/A N/A N/A N/A N/A N/A 2.630±0.00 N/A 1.074±0.00
ENSMUSG00000081992 ENSMUST00000119822 0.120±0.04 N/A 0.248±0.04 3.760±4.09 0.085±0.00 0.163±0.00 0.073±0.03 N/A 10.888±17.07 0.075±0.00 0.091±0.04 0.319±0.18 0.174±0.14 0.176±0.18
ENSMUSG00000083233 ENSMUST00000121991 N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A
ENSMUSG00000083503 ENSMUST00000118256 0.956±0.21 N/A 0.117±0.00 0.041±0.00 0.445±0.00 0.635±0.19 0.242±0.14 0.226±0.06 0.195±0.08 0.792±0.20 0.161±0.00 0.693±0.26 0.179±0.09 0.224±0.09
ENSMUSG00000084908 ENSMUST00000131588 0.072±0.01 0.334±0.22 0.012±0.00 N/A N/A 0.087±0.01 N/A 0.028±0.00 0.055±0.01 0.038±0.00 N/A 0.016±0.01 0.035±0.00 0.020±0.00
ENSMUSG00000087461 ENSMUST00000134921 0.014±0.00 N/A 0.274±0.10 0.403±0.13 0.066±0.03 0.028±0.00 0.010±0.00 0.021±0.01 0.009±0.01 0.349±0.06 N/A 0.060±0.05 0.011±0.01 0.027±0.02
ENSMUST00000147871 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENSMUST00000149707 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A 0.107±0.05 N/A N/A
ENSMUSG00000087635 ENSMUST00000117516 N/A N/A 0.029±0.00 0.076±0.02 N/A N/A 0.070±0.00 N/A 0.142±0.12 N/A 0.066±0.02 N/A 0.062±0.07 0.039±0.00

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