C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 856
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000230417 LINC00856 9606 + 10:78238255-78675109 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000421324 LINC00856-006 78238255-78675109 lincRNA
  ENST00000423770 LINC00856-003 78248808-78250451 lincRNA
  ENST00000432742 LINC00856-002 78248808-78353336 lincRNA
  ENST00000434974 LINC00856-001 78248748-78252645 lincRNA
  ENST00000510550 LINC00856-005 78406544-78550857 lincRNA
  ENST00000624665 LINC00856-004 78248740-78551355 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000421324ENST00000423770ENST00000432742ENST00000434974ENST00000510550ENST00000624665
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000421324 N/A N/A N/A 0.113±0.00 0.116±0.00 0.042±0.00 N/A N/A 0.050±0.02
ENST00000423770 0.865±0.00 N/A N/A N/A N/A N/A 0.380±0.00 0.242±0.17 N/A
ENST00000432742 N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000434974 0.131±0.07 0.032±0.01 0.006±0.00 N/A N/A 0.028±0.00 N/A 0.011±0.00 0.035±0.01
ENST00000510550 0.229±0.00 N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENST00000624665 N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A5 CIL_0008A5_0001 VISTA 10:77875813-78480338
CIL_00084G CIL_00084G_0001 VISTA 10:77912633-78517575
CIL_000809 CIL_000809_0001 VISTA 10:77918028-78521061
CIL_0007AW CIL_0007AW_0002 CGP 10:78033760-79316528
CIL_0008DQ CIL_0008DQ_0001 VISTA 10:78235692-78837330

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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