C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET-like protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000230667 SETSIP 9606 - 1:92074533-92075441 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000485873 SETSIP-001 92074533-92075411 protein_coding
  ENST00000596516 SETSIP-201 92074533-92075441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000485873ENST00000596516
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000485873 0.024±0.00 0.037±0.00 0.023±0.00 0.012±0.00 0.011±0.00 0.020±0.00 0.024±0.00 0.069±0.00 0.022±0.00 0.033±0.00 0.010±0.00 0.184±0.03
ENST00000596516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.001±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0001 VISTA 1:91505983-92108430
CIL_0008YV CIL_0008YV_0001 VISTA 1:91545179-92146674

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006334 IEA nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0045446 IDA endothelial cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003920 setb SET translocation (myeloid leukemia-associated) B protein_coding Danio_rerio
ENSDARG00000031495 seta SET translocation (myeloid leukemia-associated) A protein_coding Danio_rerio
ENSMUSG00000054766 Set SET nuclear oncogene protein_coding Mus_musculus

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