C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET-like protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485873 SETSIP-001 ENSG00000230667 9606 - 1:92074533-92075411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000485873
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000485873 0.024±0.00 0.037±0.00 0.023±0.00 0.012±0.00 0.011±0.00 0.020±0.00 0.024±0.00 0.069±0.00 0.022±0.00 0.033±0.00 0.010±0.00 0.184±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0001 VISTA 1:91505983-92108430
CIL_0008YV CIL_0008YV_0001 VISTA 1:91545179-92146674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 1081
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 1053
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 1053
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 990
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 900
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 881
ENSMUST00000120309 Gm14746-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 688
ENSMUST00000120258 Gm16420-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000190284 RP24-492P7.1-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 603
ENSMUST00000147590 Set-007 processed_transcript Mus_musculus 0 368
ENSMUST00000055820 Gm9531-002 processed_transcript Mus_musculus 0 267

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