C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: malignant T cell amplified sequence 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000232119 MCTS1 9606 + X:120594010-120621074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371315 MCTS1-002 120604321-120612312 protein_coding
  ENST00000371317 MCTS1-001 120603980-120612479 protein_coding
  ENST00000424799 MCTS1-007 120611329-120621074 processed_transcript
  ENST00000484481 MCTS1-006 120610887-120612388 processed_transcript
  ENST00000487133 MCTS1-004 120605404-120612387 processed_transcript
  ENST00000493274 MCTS1-003 120594081-120611047 processed_transcript
  ENST00000493879 MCTS1-005 120594010-120606136 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371315ENST00000371317ENST00000424799ENST00000484481ENST00000493274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371315 N/A N/A N/A 2.519±0.00 N/A N/A 0.602±0.00 N/A 0.420±0.00 N/A N/A 0.469±0.00 N/A N/A
ENST00000371317 9.447±0.00 8.524±0.00 0.413±0.00 6.189±3.30 7.187±6.24 7.719±4.54 9.215±0.00 8.539±4.98 17.357±0.00 5.065±3.20 4.564±2.27 8.751±6.79 16.382±7.79 5.450±4.58
ENST00000424799 1.206±0.00 1.604±0.00 N/A 0.824±0.76 1.721±0.00 0.486±0.35 0.388±0.17 1.291±0.31 0.416±0.00 0.293±0.01 0.394±0.00 1.247±0.84 0.181±0.06 0.539±0.30
ENST00000484481 N/A N/A N/A N/A N/A N/A 1.705±0.00 N/A N/A N/A N/A 23.668±0.00 18.070±0.00 7.462±0.00
ENST00000493274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.399±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GD CIL_0000GD_0002 CGP X:120524609-120621074
CIL_0000GE CIL_0000GE_0002 CGP X:120594010-120630150

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001731 IDA formation of translation preinitiation complex
GO:0002192 IDA IRES-dependent translational initiation
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0008284 TAS positive regulation of cell proliferation
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0032790 IDA ribosome disassembly
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025972 mcts1 malignant T cell amplified sequence 1 protein_coding Danio_rerio
ENSMUSG00000000355 Mcts1 malignant T cell amplified sequence 1 protein_coding Mus_musculus
ENSMUSG00000042814 Mcts2 malignant T cell amplified sequence 2 protein_coding Mus_musculus

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