C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: malignant T cell amplified sequence 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000355 Mcts1 10090 + X:38600578-38613426 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000365 Mcts1-001 38600655-38613426 protein_coding
  ENSMUST00000133128 Mcts1-004 38608723-38613426 processed_transcript
  ENSMUST00000134573 Mcts1-002 38601299-38606352 processed_transcript
  ENSMUST00000140204 Mcts1-003 38600578-38611833 processed_transcript
  ENSMUST00000148938 Mcts1-005 38609803-38613400 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000365ENSMUST00000133128ENSMUST00000134573ENSMUST00000140204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000365 6.034±1.07 1.886±0.00 28.453±6.52 19.643±11.08 3.842±1.62 1.262±0.70 4.412±1.19 3.693±0.33 11.940±7.42 3.527±0.18 23.590±1.11 6.399±7.68 11.491±4.99 0.646±0.18
ENSMUST00000133128 N/A N/A N/A 15.340±0.00 N/A 1.755±0.00 N/A N/A N/A N/A N/A 7.363±3.93 6.414±0.00 N/A
ENSMUST00000134573 N/A 3.118±0.00 N/A N/A 2.666±0.00 N/A 2.078±0.00 N/A 2.605±0.00 2.914±0.00 N/A 2.576±1.47 4.289±0.56 N/A
ENSMUST00000140204 3.421±0.00 2.764±0.88 N/A N/A 4.506±1.74 1.472±0.00 N/A N/A 4.085±1.17 N/A N/A 3.820±2.85 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GD CIL_0000GD_0003 CGP X:38533274-38613426
CIL_0000GE CIL_0000GE_0003 CGP X:38600578-38635087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003743 IEA translation initiation factor activity
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006413 IEA translational initiation
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025972 mcts1 malignant T cell amplified sequence 1 protein_coding Danio_rerio
ENSG00000232119 MCTS1 malignant T cell amplified sequence 1 protein_coding Homo_sapiens

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