C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000YA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101310-ENSG00000232388 CGP 9606 20:18507493-18569563
GeneTranscriptPositionBiotype
ENSG00000101310 (SEC23B)
Sec23 homolog B (S. cerevisiae) 		ENST00000262544 (SEC23B-005) 18507555-18561122 protein_coding
ENST00000336714 (SEC23B-003) 18507555-18561415 protein_coding
ENST00000377465 (SEC23B-004) 18508062-18561415 protein_coding
ENST00000377475 (SEC23B-002) 18507579-18561415 protein_coding
ENST00000422877 (SEC23B-008) 18542368-18560833 protein_coding
ENST00000450074 (SEC23B-001) 18507493-18526531 protein_coding
ENST00000474619 (SEC23B-006) 18507933-18510931 processed_transcript
ENST00000494645 (SEC23B-007) 18510977-18515984 processed_transcript
ENSG00000125821 (DTD1)
D-tyrosyl-tRNA deacylase 1 		ENST00000377452 (DTD1-001) 18587893-18763917 protein_coding
ENST00000494921 (DTD1-002) 18587964-18632178 processed_transcript
ENST00000618693 (DTD1-003) 18567453-18744216 protein_coding
ENSG00000232388 (LINC00493)
long intergenic non-protein coding RNA 493 		ENST00000411646 (LINC00493-002) 18567420-18569563 protein_coding
ENST00000435844 (LINC00493-001) 18567347-18569563 protein_coding
ENST00000608034 (LINC00493-003) 18567447-18569155 protein_coding
ENSG00000264134 (AL121893.1)
 ENST00000578930 (AL121893.1-201) 18545708-18545784 miRNA
CIL_0000YA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027429-ENSMUSG00000074754 CGP 10090 2:144556229-144595366
GeneTranscriptPositionBiotype
ENSMUSG00000027429 (Sec23b)
SEC23B (S. cerevisiae) 		ENSMUST00000028916 (Sec23b-001) 144556256-144590749 protein_coding
ENSMUST00000128210 (Sec23b-003) 144564899-144590749 processed_transcript
ENSMUST00000143573 (Sec23b-005) 144556229-144568027 protein_coding
ENSMUST00000143921 (Sec23b-007) 144556312-144559505 processed_transcript
ENSMUST00000146487 (Sec23b-002) 144577123-144581115 processed_transcript
ENSMUST00000149697 (Sec23b-006) 144556334-144564652 protein_coding
ENSMUST00000155258 (Sec23b-004) 144556281-144559396 protein_coding
ENSMUST00000155876 (Sec23b-008) 144556319-144566810 protein_coding
ENSMUSG00000074754 (Gm561)
predicted gene 561 		ENSMUST00000136628 (Gm561-001) 144594054-144595366 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YA_0001ENSG00000101310ENST00000262544ENST00000336714ENST00000377465ENST00000377475ENST00000422877ENST00000450074ENST00000474619ENST00000494645ENSG00000125821ENST00000377452ENST00000494921ENST00000618693ENSG00000232388ENST00000411646ENST00000435844ENST00000608034ENSG00000264134ENST00000578930CIL_0000YA_0002ENSMUSG00000027429ENSMUST00000028916ENSMUST00000128210ENSMUST00000143573ENSMUST00000143921ENSMUST00000146487ENSMUST00000149697ENSMUST00000155258ENSMUST00000155876ENSMUSG00000074754ENSMUST00000136628
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YA_0001ENSG00000101310ENST00000262544ENST00000336714ENST00000377475ENST00000422877ENSG00000125821ENST00000377452ENST00000494921ENST00000618693ENSG00000232388ENST00000411646ENST00000435844ENSG00000264134ENST00000578930CIL_0000YA_0002ENSMUSG00000027429ENSMUST00000028916ENSMUST00000128210ENSMUST00000143573ENSMUSG00000074754ENSMUST00000136628
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101310 ENST00000262544 4.799±0.00 5.387±0.00 N/A 7.606±0.00 N/A 3.297±0.00 1.955±0.00 11.838±10.13 5.617±0.00 6.692±0.00 0.529±0.04 8.065±0.11 8.601±2.23 15.607±0.45
ENST00000336714 0.854±0.00 N/A N/A 2.050±0.00 N/A 1.018±0.00 0.541±0.15 N/A 1.350±0.26 2.260±0.00 0.219±0.00 3.646±0.74 2.028±0.00 N/A
ENST00000377465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377475 N/A N/A 2.076±0.00 3.328±0.00 4.981±0.00 N/A N/A 1.536±0.00 3.617±0.00 1.599±0.00 N/A 4.039±1.76 1.839±0.11 2.688±0.00
ENST00000422877 6.335±0.00 10.590±0.00 N/A 19.086±0.00 10.442±0.00 5.701±0.00 N/A 36.002±0.00 10.018±0.00 17.258±0.00 0.638±0.00 9.637±0.00 6.919±0.00 25.791±0.00
ENST00000450074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125821 ENST00000377452 14.036±0.00 15.774±0.00 1.473±0.00 14.734±4.68 5.552±1.34 4.374±2.77 3.022±1.89 7.771±7.10 2.395±1.02 5.118±3.58 3.656±1.57 20.481±15.71 19.538±7.08 25.717±8.24
ENST00000494921 N/A N/A 0.699±0.00 N/A 1.289±0.00 0.425±0.00 N/A N/A N/A N/A 0.607±0.00 0.945±0.00 N/A N/A
ENST00000618693 N/A N/A N/A 17.143±0.00 N/A N/A N/A 0.894±0.00 N/A 1.766±0.00 N/A N/A N/A N/A
ENSG00000232388 ENST00000411646 10.063±0.00 13.410±0.00 N/A N/A 16.262±0.00 6.975±5.41 7.596±5.66 0.858±0.00 6.433±4.76 3.502±0.00 9.950±0.94 24.657±17.58 12.965±2.77 18.225±0.00
ENST00000435844 14.003±0.00 17.221±0.00 N/A 19.232±0.00 15.985±10.46 30.983±0.00 15.931±13.61 19.448±17.91 11.318±8.85 31.639±0.00 25.511±23.52 43.361±7.55 24.396±3.14 17.437±0.00
ENST00000608034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264134 ENST00000578930 N/A N/A N/A N/A 0.759±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027429 ENSMUST00000028916 16.022±9.85 6.451±1.41 8.716±2.91 6.223±3.14 5.484±0.62 5.978±1.52 3.024±0.48 12.662±2.39 8.489±3.60 9.742±1.26 1.095±0.47 14.428±6.91 14.596±7.06 5.237±2.42
ENSMUST00000128210 5.281±2.75 16.959±4.45 4.930±0.00 8.606±1.77 4.914±1.57 13.744±3.02 N/A 9.648±3.52 8.417±2.93 5.682±1.29 0.680±0.00 21.135±7.17 8.868±3.61 4.543±1.21
ENSMUST00000143573 N/A N/A 7.376±0.00 6.063±0.00 N/A N/A N/A N/A 5.274±0.00 N/A N/A N/A 15.872±0.73 N/A
ENSMUST00000143921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074754 ENSMUST00000136628 5.021±0.54 0.620±0.21 26.211±4.07 23.436±14.10 3.362±2.27 1.650±0.32 15.217±1.57 13.678±2.68 9.511±4.99 3.208±0.53 43.834±2.69 7.884±10.09 18.890±12.06 2.005±0.94

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