C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HOXA transcript antisense RNA, myeloid-specific 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000233429 HOTAIRM1 9606 + 7:27095647-27100265 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000425358 HOTAIRM1-004 27096233-27099966 antisense
  ENST00000428939 HOTAIRM1-003 27098839-27100139 antisense
  ENST00000429611 HOTAIRM1-002 27096124-27099966 antisense
  ENST00000434063 HOTAIRM1-001 27096094-27100154 antisense
  ENST00000495032 HOTAIRM1-005 27095647-27096327 antisense
  ENST00000593300 HOTAIRM1-006 27099619-27100265 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000425358ENST00000428939ENST00000429611ENST00000434063ENST00000593300
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000425358 N/A N/A N/A 5.592±0.00 1.480±0.00 0.190±0.00 N/A N/A N/A N/A 0.520±0.00 0.134±0.02 N/A
ENST00000428939 N/A N/A N/A 1.111±0.41 0.641±0.00 0.223±0.00 0.928±0.37 0.913±0.00 2.844±2.33 N/A 1.509±0.00 N/A 0.753±0.00
ENST00000429611 N/A N/A N/A 0.456±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434063 1.976±0.00 2.676±0.00 N/A N/A N/A N/A 2.272±0.00 N/A N/A 0.286±0.00 0.595±0.00 0.084±0.00 0.457±0.00
ENST00000593300 0.600±0.00 2.790±0.00 0.237±0.00 1.416±0.60 1.111±0.00 0.179±0.00 1.941±0.00 0.380±0.00 2.977±1.89 0.428±0.00 N/A 0.175±0.03 0.880±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0003PD CIL_0003PD_0001 CGP 7:26667062-27095996
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003PE CIL_0003PE_0001 CGP 7:27092993-27102811

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

Loading