C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000233593 RP4-665J23.1 9606 - 1:90782986-90851650 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000435649 RP4-665J23.1-004 90782986-90851515 lincRNA
  ENST00000443802 RP4-665J23.1-003 90831869-90851650 lincRNA
  ENST00000455680 RP4-665J23.1-001 90829547-90836161 retained_intron
  ENST00000606660 RP4-665J23.1-002 90829547-90851618 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435649ENST00000443802ENST00000455680ENST00000606660
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435649 0.473±0.00 0.887±0.00 4.656±1.05 0.874±0.00 0.655±0.00 0.506±0.00 1.267±1.08 2.465±2.11 0.913±0.00 1.878±0.00 3.607±0.02 0.306±0.13 N/A
ENST00000443802 1.177±0.00 N/A N/A N/A 0.390±0.04 N/A 0.123±0.00 N/A 0.774±0.00 0.602±0.00 0.028±0.00 0.134±0.00 5.691±0.00
ENST00000455680 N/A 0.216±0.00 0.405±0.00 N/A N/A N/A N/A N/A 0.177±0.00 N/A 0.023±0.00 0.061±0.00 2.348±1.39
ENST00000606660 0.097±0.00 N/A N/A 0.224±0.02 0.106±0.00 0.179±0.00 0.184±0.17 0.093±0.02 0.067±0.00 0.070±0.00 0.299±0.15 0.080±0.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KP CIL_0007KP_0002 UCNEbase 1:90373797-90945738
CIL_000906 CIL_000906_0001 VISTA 1:90540005-91141658

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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