C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000906_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs612 VISTA 9606 1:90540005-91141658
GeneTranscriptPositionBiotype
ENSG00000122482 (ZNF644)
zinc finger protein 644 		ENST00000337393 (ZNF644-201) 90915302-91022255 protein_coding
ENST00000347275 (ZNF644-002) 90915304-91021457 protein_coding
ENST00000361321 (ZNF644-003) 90916185-91022272 protein_coding
ENST00000370440 (ZNF644-001) 90915298-91021473 protein_coding
ENST00000467231 (ZNF644-007) 90916390-91022014 processed_transcript
ENST00000474405 (ZNF644-008) 90972744-90982370 processed_transcript
ENST00000479798 (ZNF644-010) 90916490-90935528 processed_transcript
ENST00000482467 (ZNF644-006) 91020529-91021725 processed_transcript
ENST00000482709 (ZNF644-009) 90916791-90918391 processed_transcript
ENST00000495966 (ZNF644-005) 91020448-91022055 processed_transcript
ENST00000498303 (ZNF644-004) 90940949-91022081 processed_transcript
ENST00000621077 (ZNF644-202) 90937883-90940120 protein_coding
ENSG00000143032 (BARHL2)
BarH-like homeobox 2 		ENST00000370445 (BARHL2-001) 90711539-90717237 protein_coding
ENSG00000199666 (U3)
Small nucleolar RNA U3 		ENST00000362796 (U3.1-202) 90657750-90657964 snoRNA
ENSG00000225446 (RP4-665J23.2)
 ENST00000425185 (RP4-665J23.2-001) 90851759-90854286 lincRNA
ENSG00000232393 (RPL5P6)
ribosomal protein L5 pseudogene 6 		ENST00000425640 (RPL5P6-001) 91023919-91024804 processed_pseudogene
ENSG00000232882 (PHKA1P1)
phosphorylase kinase, alpha 1 pseudogene 1 		ENST00000420457 (PHKA1P1-001) 90892992-90893612 processed_pseudogene
ENSG00000233593 (RP4-665J23.1)
 ENST00000435649 (RP4-665J23.1-004) 90782986-90851515 lincRNA
ENST00000443802 (RP4-665J23.1-003) 90831869-90851650 lincRNA
ENST00000455680 (RP4-665J23.1-001) 90829547-90836161 retained_intron
ENST00000606660 (RP4-665J23.1-002) 90829547-90851618 retained_intron
ENSG00000272094 (RP4-665J23.4)
 ENST00000606898 (RP4-665J23.4-001) 90860550-90862920 lincRNA
CIL_000906_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs612 VISTA 10090 5:106264330-106866018
GeneTranscriptPositionBiotype
ENSMUSG00000034384 (Barhl2)
BarH-like 2 (Drosophila) 		ENSMUST00000086795 (Barhl2-001) 106452523-106458166 protein_coding
ENSMUSG00000043410 (Hfm1)
HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 		ENSMUST00000112690 (Hfm1-201) 106840197-106925890 protein_coding
ENSMUST00000117588 (Hfm1-001) 106840194-106926321 protein_coding
ENSMUST00000134292 (Hfm1-003) 106901887-106926258 retained_intron
ENSMUST00000148495 (Hfm1-004) 106840192-106895327 nonsense_mediated_decay
ENSMUST00000148686 (Hfm1-002) 106901887-106925890 nonsense_mediated_decay
ENSMUST00000155171 (Hfm1-005) 106841562-106889922 protein_coding
ENSMUSG00000049606 (Zfp644)
zinc finger protein 644 		ENSMUST00000045466 (Zfp644-002) 106616741-106695975 protein_coding
ENSMUST00000112694 (Zfp644-019) 106617073-106624390 protein_coding
ENSMUST00000112695 (Zfp644-006) 106616744-106696597 protein_coding
ENSMUST00000112696 (Zfp644-001) 106616739-106696830 protein_coding
ENSMUST00000112698 (Zfp644-201) 106616742-106696830 protein_coding
ENSMUST00000122980 (Zfp644-018) 106638069-106667617 protein_coding
ENSMUST00000124263 (Zfp644-014) 106638284-106696564 protein_coding
ENSMUST00000125895 (Zfp644-007) 106617970-106696805 processed_transcript
ENSMUST00000127434 (Zfp644-003) 106636807-106696826 protein_coding
ENSMUST00000127572 (Zfp644-015) 106690591-106696546 processed_transcript
ENSMUST00000127932 (Zfp644-009) 106695055-106697287 retained_intron
ENSMUST00000135108 (Zfp644-008) 106638427-106696650 protein_coding
ENSMUST00000137285 (Zfp644-004) 106637818-106696564 protein_coding
ENSMUST00000142391 (Zfp644-005) 106689820-106696166 retained_intron
ENSMUST00000148192 (Zfp644-016) 106690604-106696544 processed_transcript
ENSMUST00000155495 (Zfp644-010) 106638237-106696650 protein_coding
ENSMUST00000156851 (Zfp644-017) 106695360-106696012 processed_transcript
ENSMUSG00000088602 (Gm24191)
predicted gene, 24191 		ENSMUST00000157977 (Gm24191-201) 106669999-106670120 snRNA
ENSMUSG00000097018 (Gm26872)
predicted gene, 26872 		ENSMUST00000180862 (Gm26872-001) 106465800-106471007 lincRNA
ENSMUSG00000101237 (RP24-421H18.4)
predicted gene 29464 		ENSMUST00000187692 (RP24-421H18.4-001) 106574875-106575387 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000906_0001ENSG00000122482ENST00000337393ENST00000347275ENST00000361321ENST00000370440ENST00000467231ENST00000474405ENST00000479798ENST00000482467ENST00000482709ENST00000495966ENST00000498303ENST00000621077ENSG00000143032ENST00000370445ENSG00000199666ENST00000362796ENSG00000225446ENST00000425185ENSG00000232393ENST00000425640ENSG00000232882ENST00000420457ENSG00000233593ENST00000435649ENST00000443802ENST00000455680ENST00000606660ENSG00000272094ENST00000606898CIL_000906_0002ENSMUSG00000034384ENSMUST00000086795ENSMUSG00000043410ENSMUST00000112690ENSMUST00000117588ENSMUST00000134292ENSMUST00000148495ENSMUST00000148686ENSMUST00000155171ENSMUSG00000049606ENSMUST00000045466ENSMUST00000112694ENSMUST00000112695ENSMUST00000112696ENSMUST00000112698ENSMUST00000122980ENSMUST00000124263ENSMUST00000125895ENSMUST00000127434ENSMUST00000127572ENSMUST00000127932ENSMUST00000135108ENSMUST00000137285ENSMUST00000142391ENSMUST00000148192ENSMUST00000155495ENSMUST00000156851ENSMUSG00000088602ENSMUST00000157977ENSMUSG00000097018ENSMUST00000180862ENSMUSG00000101237ENSMUST00000187692
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000906_0001ENSG00000122482ENST00000337393ENST00000347275ENST00000361321ENST00000370440ENST00000479798ENST00000621077ENSG00000143032ENST00000370445ENSG00000199666ENST00000362796ENSG00000225446ENST00000425185ENSG00000232393ENST00000425640ENSG00000232882ENST00000420457ENSG00000233593ENST00000435649ENST00000443802ENST00000455680ENST00000606660ENSG00000272094ENST00000606898CIL_000906_0002ENSMUSG00000034384ENSMUST00000086795ENSMUSG00000043410ENSMUST00000112690ENSMUST00000117588ENSMUST00000134292ENSMUST00000148495ENSMUST00000148686ENSMUST00000155171ENSMUSG00000049606ENSMUST00000045466ENSMUST00000112694ENSMUST00000112695ENSMUST00000112696ENSMUST00000112698ENSMUST00000122980ENSMUST00000125895ENSMUST00000127434ENSMUST00000127572ENSMUST00000142391ENSMUST00000148192ENSMUSG00000088602ENSMUST00000157977ENSMUSG00000097018ENSMUST00000180862ENSMUSG00000101237ENSMUST00000187692
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122482 ENST00000337393 N/A 2.507±0.00 0.489±0.00 3.611±0.37 1.963±0.27 3.783±0.71 3.171±0.00 2.647±0.00 3.771±2.88 1.746±0.00 2.189±0.40 2.438±1.06 1.711±0.93 4.351±0.77
ENST00000347275 N/A 2.714±0.00 N/A N/A 1.456±0.00 N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A
ENST00000361321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.256±0.00 N/A N/A
ENST00000370440 0.481±0.00 N/A 1.325±0.00 3.512±0.00 N/A 1.837±0.00 0.705±0.00 1.020±0.00 N/A 4.893±0.00 0.716±0.00 1.246±0.02 0.579±0.07 N/A
ENST00000467231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.411±0.00
ENST00000482467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621077 N/A N/A N/A N/A N/A N/A 1.161±0.00 N/A N/A N/A N/A N/A N/A 2.250±0.00
ENSG00000143032 ENST00000370445 N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 2.932±0.29
ENSG00000199666 ENST00000362796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.17
ENSG00000225446 ENST00000425185 N/A 0.057±0.00 N/A 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.569±0.41
ENSG00000232393 ENST00000425640 0.052±0.00 0.123±0.00 0.057±0.00 0.013±0.00 0.040±0.00 0.050±0.00 0.013±0.00 0.040±0.00 N/A N/A 0.109±0.00 0.125±0.00 N/A 0.059±0.03
ENSG00000232882 ENST00000420457 N/A N/A 0.103±0.00 0.197±0.00 N/A N/A N/A 0.299±0.00 0.312±0.00 N/A N/A N/A N/A N/A
ENSG00000233593 ENST00000435649 0.473±0.00 0.887±0.00 N/A 4.656±1.05 0.874±0.00 0.655±0.00 0.506±0.00 1.267±1.08 2.465±2.11 0.913±0.00 1.878±0.00 3.607±0.02 0.306±0.13 N/A
ENST00000443802 1.177±0.00 N/A N/A N/A N/A 0.390±0.04 N/A 0.123±0.00 N/A 0.774±0.00 0.602±0.00 0.028±0.00 0.134±0.00 5.691±0.00
ENST00000455680 N/A 0.216±0.00 N/A 0.405±0.00 N/A N/A N/A N/A N/A 0.177±0.00 N/A 0.023±0.00 0.061±0.00 2.348±1.39
ENST00000606660 0.097±0.00 N/A N/A N/A 0.224±0.02 0.106±0.00 0.179±0.00 0.184±0.17 0.093±0.02 0.067±0.00 0.070±0.00 0.299±0.15 0.080±0.04 N/A
ENSG00000272094 ENST00000606898 0.155±0.00 0.358±0.00 N/A 0.244±0.00 0.176±0.00 0.088±0.00 0.140±0.00 0.263±0.00 0.011±0.00 0.030±0.00 0.054±0.00 0.214±0.22 0.042±0.00 0.104±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034384 ENSMUST00000086795 N/A 0.012±0.00 0.003±0.00 5.191±4.10 0.013±0.00 0.023±0.01 0.011±0.00 0.012±0.00 0.018±0.02 0.011±0.00 N/A 0.037±0.02 0.011±0.01 0.129±0.05
ENSMUSG00000043410 ENSMUST00000112690 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.040±0.00 N/A 1.070±0.46
ENSMUST00000117588 0.009±0.00 N/A 0.006±0.00 1.305±1.27 N/A N/A 0.009±0.00 N/A 0.009±0.00 N/A N/A 0.018±0.00 0.007±0.00 1.472±0.99
ENSMUST00000134292 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.038±0.00 N/A N/A N/A N/A
ENSMUST00000148495 0.086±0.00 N/A 0.005±0.00 0.040±0.00 N/A N/A N/A N/A 0.014±0.01 0.036±0.00 0.006±0.00 0.014±0.00 N/A N/A
ENSMUST00000148686 N/A N/A 0.015±0.01 N/A N/A N/A N/A N/A 0.028±0.02 N/A N/A 0.028±0.01 0.015±0.00 N/A
ENSMUST00000155171 N/A N/A 0.004±0.00 0.186±0.00 N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.237±0.00 0.030±0.02 1.745±0.00
ENSMUSG00000049606 ENSMUST00000045466 N/A 0.658±0.00 1.731±0.26 5.105±1.11 0.664±0.00 N/A 0.930±0.00 N/A 1.573±0.49 N/A 0.681±0.00 3.446±0.87 1.210±0.54 1.450±0.00
ENSMUST00000112694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.988±1.51
ENSMUST00000112695 N/A N/A N/A 6.351±0.00 N/A N/A N/A N/A N/A N/A 1.136±0.00 N/A N/A N/A
ENSMUST00000112696 1.534±0.62 N/A 3.405±0.01 4.999±0.37 N/A 1.041±0.00 0.535±0.00 0.931±0.00 1.952±1.11 1.644±0.00 0.877±0.37 3.300±1.79 1.618±0.84 0.968±0.11
ENSMUST00000112698 2.184±0.00 N/A 2.999±0.00 N/A 2.153±1.48 0.875±0.40 N/A 0.719±0.20 1.116±0.56 1.413±0.00 1.247±0.26 2.576±0.49 1.363±0.00 N/A
ENSMUST00000122980 N/A 2.503±0.00 N/A N/A 4.494±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125895 N/A 2.118±0.44 N/A N/A N/A N/A N/A N/A 1.108±0.00 N/A N/A 4.387±1.26 9.108±1.42 16.437±0.00
ENSMUST00000127434 N/A 1.156±0.42 N/A N/A 1.627±0.28 1.182±0.26 N/A 1.355±0.11 0.657±0.05 3.111±0.84 N/A 2.944±0.48 N/A N/A
ENSMUST00000127572 N/A 1.699±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142391 N/A 1.183±0.22 N/A N/A 1.817±0.00 N/A N/A N/A N/A N/A N/A 2.610±0.00 N/A N/A
ENSMUST00000148192 N/A 1.101±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088602 ENSMUST00000157977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.384±0.00 N/A
ENSMUSG00000097018 ENSMUST00000180862 N/A N/A N/A 0.173±0.12 N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A 0.010±0.00 0.051±0.03
ENSMUSG00000101237 ENSMUST00000187692 N/A N/A N/A N/A 0.284±0.00 N/A N/A N/A 0.027±0.00 N/A N/A N/A 0.229±0.00 0.129±0.00

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