Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	long intergenic non-protein coding RNA 1158
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000233639	LINC01158	9606	-	2:104807572-104853183	processed_transcript
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000413121		LINC01158-004	104807572-104851461	lincRNA
	ENST00000443988		LINC01158-002	104807573-104851453	antisense
	ENST00000447876		LINC01158-003	104807573-104853183	antisense
	ENST00000454729		LINC01158-005	104807577-104851476	antisense
	ENST00000458253		LINC01158-001	104807577-104851458	antisense

Expression Patterns

Transcript ID	Adipose	Bladder	Brain	Colon	Heart	Kidney	Lung	Ovary	Testis
ENST00000413121	N/A	N/A	1.364±0.00	N/A	N/A	N/A	N/A	0.051±0.00	0.739±0.00
ENST00000443988	N/A	N/A	1.500±0.00	N/A	N/A	3.295±0.00	N/A	0.040±0.00	N/A
ENST00000447876	0.561±0.00	0.442±0.00	4.199±3.17	0.751±0.00	0.020±0.00	3.556±0.00	0.101±0.00	0.063±0.00	N/A
ENST00000454729	N/A	N/A	N/A	N/A	N/A	1.436±0.00	N/A	N/A	N/A
ENST00000458253	N/A	N/A	0.512±0.00	N/A	N/A	1.221±0.00	N/A	N/A	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0004IW	CIL_0004IW_0002	CGP	2:102736908-104860471
CIL_0007JQ	CIL_0007JQ_0001	UCNEbase	2:102922366-105081592
CIL_0007T8	CIL_0007T8_0001	VISTA	2:104216357-104817372
CIL_0007ZQ	CIL_0007ZQ_0001	VISTA	2:104271403-104872401
CIL_0008TY	CIL_0008TY_0001	VISTA	2:104337637-104939940
CIL_0008JA	CIL_0008JA_0001	VISTA	2:104383886-104985199
CIL_0008IN	CIL_0008IN_0001	VISTA	2:104401122-105003398
CIL_0008O2	CIL_0008O2_0001	VISTA	2:104536515-105137711
CIL_0008KZ	CIL_0008KZ_0001	VISTA	2:104548528-105151080
CIL_000902	CIL_000902_0001	VISTA	2:104600279-105202032
CIL_00096O	CIL_00096O_0001	VISTA	2:104780753-105381700

Gene Ontology
No GO terms available.

No Homologs available.
Homologs

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