C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho guanine nucleotide exchange factor (GEF) 38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000236699 ARHGEF38 9606 + 4:105552620-105708093 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265154 ARHGEF38-004 105552620-105631680 protein_coding
  ENST00000420470 ARHGEF38-001 105552622-105680913 protein_coding
  ENST00000503289 ARHGEF38-003 105678140-105695678 processed_transcript
  ENST00000506828 ARHGEF38-005 105552893-105645298 processed_transcript
  ENST00000508036 ARHGEF38-002 105632710-105667533 processed_transcript
  ENST00000508961 ARHGEF38-007 105700134-105708093 processed_transcript
  ENST00000510406 ARHGEF38-006 105695524-105708085 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungOvaryENST00000265154ENST00000420470ENST00000506828
Transcript ID Bladder Breast Colon Lung Ovary
ENST00000265154 3.436±0.00 2.942±0.00 3.356±0.00 10.718±0.00 9.682±0.00
ENST00000420470 0.616±0.00 0.672±0.00 0.814±0.00 1.630±0.95 1.989±0.41
ENST00000506828 8.825±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P5 CIL_0006P5_0002 CGP 4:105369077-105708093
CIL_0002LD CIL_0002LD_0002 CGP 4:105552620-105895986

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079377 ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 protein_coding Danio_rerio

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