C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002LD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079377-ENSDARG00000091678 CGP 7955 1:25302596-25326343
GeneTranscriptPositionBiotype
ENSDARG00000079377 (ARHGEF38)
Rho guanine nucleotide exchange factor (GEF) 38
ENSDART00000112263 (ARHGEF38-201) 25302596-25319959 protein_coding
ENSDARG00000091678 (ints12)
integrator complex subunit 12
ENSDART00000125690 (ints12-202) 25321186-25326343 protein_coding
CIL_0002LD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000236699-ENSG00000138785 CGP 9606 4:105552620-105895986
GeneTranscriptPositionBiotype
ENSG00000138780 (GSTCD)
glutathione S-transferase, C-terminal domain containing
ENST00000360505 (GSTCD-002) 105710810-105845754 protein_coding
ENST00000394728 (GSTCD-012) 105712511-105845978 protein_coding
ENST00000394730 (GSTCD-001) 105708784-105847725 protein_coding
ENST00000484843 (GSTCD-003) 105708787-105823690 retained_intron
ENST00000503409 (GSTCD-011) 105717626-105719559 retained_intron
ENST00000507281 (GSTCD-005) 105708787-105761885 protein_coding
ENST00000509336 (GSTCD-009) 105710846-105719135 protein_coding
ENST00000510865 (GSTCD-008) 105710813-105719133 protein_coding
ENST00000512828 (GSTCD-007) 105708778-105717735 protein_coding
ENST00000515255 (GSTCD-004) 105708784-105845709 processed_transcript
ENST00000515279 (GSTCD-006) 105708818-105847728 protein_coding
ENSG00000138785 (INTS12)
integrator complex subunit 12
ENST00000340139 (INTS12-001) 105682627-105708681 protein_coding
ENST00000394735 (INTS12-002) 105682627-105708081 protein_coding
ENST00000416543 (INTS12-006) 105695560-105708639 protein_coding
ENST00000420368 (INTS12-003) 105693401-105708659 protein_coding
ENST00000433009 (INTS12-009) 105695562-105708683 protein_coding
ENST00000451321 (INTS12-005) 105682627-105709108 protein_coding
ENST00000493425 (INTS12-004) 105683062-105687079 retained_intron
ENST00000503746 (INTS12-007) 105693318-105708665 protein_coding
ENST00000510876 (INTS12-011) 105699873-105895986 protein_coding
ENST00000515819 (INTS12-008) 105699951-105708656 protein_coding
ENST00000618810 (INTS12-201) 105682630-105700016 protein_coding
ENSG00000236699 (ARHGEF38)
Rho guanine nucleotide exchange factor (GEF) 38
ENST00000265154 (ARHGEF38-004) 105552620-105631680 protein_coding
ENST00000420470 (ARHGEF38-001) 105552622-105680913 protein_coding
ENST00000503289 (ARHGEF38-003) 105678140-105695678 processed_transcript
ENST00000506828 (ARHGEF38-005) 105552893-105645298 processed_transcript
ENST00000508036 (ARHGEF38-002) 105632710-105667533 processed_transcript
ENST00000508961 (ARHGEF38-007) 105700134-105708093 processed_transcript
ENST00000510406 (ARHGEF38-006) 105695524-105708085 processed_transcript
ENSG00000249885 (ARHGEF38-IT1)
ARHGEF38 intronic transcript 1 (non-protein coding)
ENST00000512262 (ARHGEF38-IT1-001) 105561591-105570238 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LD_0001ENSDARG00000079377ENSDART00000112263ENSDARG00000091678ENSDART00000125690CIL_0002LD_0002ENSG00000138780ENST00000360505ENST00000394728ENST00000394730ENST00000484843ENST00000503409ENST00000507281ENST00000509336ENST00000510865ENST00000512828ENST00000515255ENST00000515279ENSG00000138785ENST00000340139ENST00000394735ENST00000416543ENST00000420368ENST00000433009ENST00000451321ENST00000493425ENST00000503746ENST00000510876ENST00000515819ENST00000618810ENSG00000236699ENST00000265154ENST00000420470ENST00000503289ENST00000506828ENST00000508036ENST00000508961ENST00000510406ENSG00000249885ENST00000512262
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LD_0001ENSDARG00000079377ENSDART00000112263ENSDARG00000091678ENSDART00000125690CIL_0002LD_0002ENSG00000138780ENST00000360505ENST00000394728ENST00000394730ENST00000484843ENST00000515255ENST00000515279ENSG00000138785ENST00000340139ENST00000451321ENST00000618810ENSG00000236699ENST00000265154ENST00000420470ENST00000506828ENSG00000249885ENST00000512262
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079377 ENSDART00000112263 N/A N/A N/A 0.056±0.00 N/A N/A 0.055±0.04 0.163±0.00 0.114±0.00 N/A N/A N/A N/A N/A
ENSDARG00000091678 ENSDART00000125690 N/A N/A N/A 0.691±0.32 N/A N/A 0.432±0.04 0.940±0.00 0.052±0.00 N/A 0.120±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138780 ENST00000360505 N/A N/A N/A 0.991±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.160±0.00
ENST00000394728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.544±0.00 N/A N/A N/A
ENST00000394730 N/A N/A N/A 0.749±0.03 N/A 0.461±0.00 0.299±0.00 1.900±0.00 0.735±0.00 0.999±0.00 N/A N/A N/A N/A
ENST00000484843 N/A N/A N/A N/A N/A 1.724±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.801±0.00 6.919±0.00
ENST00000515279 0.912±0.00 N/A 1.337±0.00 N/A 1.066±0.25 0.503±0.00 0.594±0.00 1.330±0.00 N/A 2.029±0.00 N/A 2.217±0.74 0.849±0.15 1.489±0.00
ENSG00000138785 ENST00000340139 2.435±0.00 2.521±0.00 N/A 2.595±0.00 3.730±0.00 1.711±0.00 1.755±1.27 1.453±0.00 1.676±0.00 2.023±0.00 1.639±0.18 3.840±0.81 1.501±0.19 7.250±0.00
ENST00000394735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451321 N/A N/A N/A 0.939±0.00 N/A 1.545±0.00 0.455±0.00 1.272±0.00 0.800±0.00 N/A N/A N/A 0.997±0.00 N/A
ENST00000493425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618810 4.477±0.00 7.528±0.00 N/A 2.036±0.49 2.701±0.00 2.400±0.28 3.647±2.87 3.928±2.85 5.843±0.00 3.328±0.00 7.785±0.00 6.000±0.63 6.021±0.02 6.167±0.00
ENSG00000236699 ENST00000265154 N/A N/A 3.436±0.00 N/A 2.942±0.00 3.356±0.00 N/A N/A N/A 10.718±0.00 N/A 9.682±0.00 N/A N/A
ENST00000420470 N/A N/A 0.616±0.00 N/A 0.672±0.00 0.814±0.00 N/A N/A N/A 1.630±0.95 N/A 1.989±0.41 N/A N/A
ENST00000503289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506828 N/A N/A 8.825±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249885 ENST00000512262 N/A N/A N/A N/A 0.212±0.19 N/A N/A 0.184±0.00 N/A 1.324±0.00 N/A 0.157±0.00 N/A 0.153±0.07

Loading