C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000239306 RBM14 9606 + 11:66616582-66627347 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310137 RBM14-001 66616582-66627347 protein_coding
  ENST00000393979 RBM14-002 66616626-66627343 protein_coding
  ENST00000409372 RBM14-003 66616630-66624593 protein_coding
  ENST00000409738 RBM14-014 66616715-66626489 protein_coding
  ENST00000443702 RBM14-004 66616646-66624467 protein_coding
  ENST00000460762 RBM14-005 66617129-66618532 processed_transcript
  ENST00000461478 RBM14-006 66617143-66624498 processed_transcript
  ENST00000496694 RBM14-007 66619045-66624222 processed_transcript
  ENST00000512283 RBM14-013 66616630-66617373 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310137ENST00000393979
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310137 15.182±0.00 10.618±0.00 2.511±0.00 8.768±0.00 18.499±0.00 11.434±0.00 5.698±3.19 15.771±9.61 10.772±0.00 26.232±0.00 7.201±3.69 25.109±6.09 17.997±3.74 25.095±4.84
ENST00000393979 N/A N/A N/A 11.720±0.00 N/A 18.333±0.00 N/A 27.623±0.00 N/A N/A N/A N/A N/A 28.504±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YI CIL_0003YI_0002 CGP 11:66592821-66627347

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001104 NAS RNA polymerase II transcription cofactor activity
GO:0003676 IEA nucleic acid binding
GO:0003723 NAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IPI transcription factor complex
GO:0006260 NAS DNA replication
GO:0006281 NAS DNA repair
GO:0006310 NAS DNA recombination
GO:0006366 NAS transcription from RNA polymerase II promoter
GO:0009725 TAS response to hormone
GO:0016575 IPI histone deacetylation
GO:0016592 NAS mediator complex
GO:0030374 IPI ligand-dependent nuclear receptor transcription coactivator activity
GO:0030520 NAS intracellular estrogen receptor signaling pathway
GO:0030529 TAS ribonucleoprotein complex
GO:0030674 NAS protein binding, bridging
GO:0042921 NAS glucocorticoid receptor signaling pathway
GO:0044822 IDA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001285 rbm14b RNA binding motif protein 14b protein_coding Danio_rerio
ENSDARG00000012723 rbm14a RNA binding motif protein 14a protein_coding Danio_rerio
ENSMUSG00000006456 Rbm14 RNA binding motif protein 14 protein_coding Mus_musculus

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