C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATS, stromal antigen 3 opposite strand
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000239521 GATS 9606 - 7:100200653-100272218 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328453 GATS-011 100200653-100272206 nonsense_mediated_decay
  ENST00000414739 GATS-009 100212022-100272214 nonsense_mediated_decay
  ENST00000414997 GATS-007 100202213-100211551 processed_transcript
  ENST00000435519 GATS-010 100211584-100272214 nonsense_mediated_decay
  ENST00000436886 GATS-014 100200653-100272218 protein_coding
  ENST00000437485 GATS-005 100202290-100223698 processed_transcript
  ENST00000440058 GATS-008 100202241-100223943 processed_transcript
  ENST00000445230 GATS-006 100211935-100215179 processed_transcript
  ENST00000454084 GATS-004 100202313-100272187 protein_coding
  ENST00000538588 GATS-013 100222645-100246548 processed_transcript
  ENST00000543273 GATS-002 100200653-100272208 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000328453ENST00000414739ENST00000436886ENST00000538588ENST00000543273
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000328453 5.075±0.00 9.464±3.44 1.372±0.69 1.188±0.67 0.613±0.00 N/A 0.841±0.15 19.438±0.00 4.568±1.39 1.028±0.15 10.842±0.00
ENST00000414739 N/A N/A N/A 1.807±0.00 0.925±0.00 1.295±0.00 N/A N/A N/A 2.112±0.10 N/A
ENST00000436886 N/A 7.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538588 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.168±0.00 N/A
ENST00000543273 N/A 9.897±0.00 N/A N/A 0.957±0.00 N/A N/A 4.169±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0005CH CIL_0005CH_0001 CGP 7:100169606-100221488

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018985 gatsl2 GATS protein-like 2 protein_coding Danio_rerio
ENSMUSG00000015944 Gatsl2 GATS protein-like 2 protein_coding Mus_musculus

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