C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000239922 RP11-71N10.1 9606 + 3:147940004-148006755 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000467198 RP11-71N10.1-001 147940004-147943014 lincRNA
  ENST00000485006 RP11-71N10.1-002 147940020-148006755 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungTestisENST00000467198ENST00000485006
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Testis
ENST00000467198 0.003±0.00 0.036±0.00 0.264±0.00 0.039±0.00 0.014±0.00 0.009±0.00 0.006±0.00 0.003±0.00 0.023±0.00 0.009±0.00
ENST00000485006 N/A N/A 1.279±0.00 N/A N/A 0.033±0.00 N/A N/A N/A 0.210±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JF CIL_0007JF_0001 UCNEbase 3:146747615-148369526
CIL_0009D8 CIL_0009D8_0001 VISTA 3:147360760-147962816
CIL_0009BL CIL_0009BL_0001 VISTA 3:147375234-147976562
CIL_000841 CIL_000841_0001 VISTA 3:147545622-148148817
CIL_0008F2 CIL_0008F2_0001 VISTA 3:147633889-148235649
CIL_0008PJ CIL_0008PJ_0001 VISTA 3:147730228-148331792
CIL_0008JR CIL_0008JR_0001 VISTA 3:147735523-148337831
CIL_000999 CIL_000999_0001 VISTA 3:147775420-148376460
CIL_00081P CIL_00081P_0001 VISTA 3:147783228-148384382
CIL_0008VT CIL_0008VT_0001 VISTA 3:147784570-148385799

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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