C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HOXA11 antisense RNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000240990 HOXA11-AS 9606 + 7:27184518-27189293 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000479766 HOXA11-AS-005 27187819-27189220 antisense
  ENST00000520360 HOXA11-AS-001 27184518-27189167 antisense
  ENST00000520395 HOXA11-AS-004 27185534-27187121 antisense
  ENST00000522674 HOXA11-AS-002 27185408-27189293 antisense
  ENST00000522863 HOXA11-AS-003 27184671-27189167 antisense

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverMuscleOvaryTestisENST00000479766ENST00000520360ENST00000520395ENST00000522674ENST00000522863
Transcript ID Adipose Adrenal Breast Colon Heart Liver Muscle Ovary Testis
ENST00000479766 0.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520360 N/A N/A N/A N/A N/A 0.812±0.00 N/A N/A 1.035±0.00
ENST00000520395 N/A N/A N/A N/A 0.123±0.00 N/A N/A N/A N/A
ENST00000522674 N/A 0.176±0.00 0.183±0.00 13.782±0.00 N/A 0.985±0.00 1.011±0.17 0.682±0.00 N/A
ENST00000522863 0.358±0.00 N/A 0.090±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003P7 CIL_0003P7_0001 CGP 7:27170591-27185223
CIL_0003P8 CIL_0003P8_0001 CGP 7:27181510-27200106

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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