C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 22 open reading frame 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000242259 C22orf39 9606 - 22:19351368-19448232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333059 C22orf39-004 19443371-19447697 protein_coding
  ENST00000399562 C22orf39-001 19441777-19448232 protein_coding
  ENST00000399568 C22orf39-002 19440886-19447692 protein_coding
  ENST00000509549 C22orf39-003 19351368-19447691 nonsense_mediated_decay
  ENST00000542103 C22orf39-201 19440908-19448232 protein_coding
  ENST00000611555 C22orf39-202 19443150-19448232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLungOvaryPlacentaTestisENST00000333059ENST00000399562ENST00000399568ENST00000509549
Transcript ID Colon Heart Lung Ovary Placenta Testis
ENST00000333059 N/A 3.029±0.00 N/A N/A N/A N/A
ENST00000399562 N/A N/A 2.802±0.98 N/A N/A N/A
ENST00000399568 9.413±0.00 N/A 7.715±0.00 N/A N/A N/A
ENST00000509549 N/A N/A N/A 15.744±0.00 7.753±0.00 12.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F0 CIL_0005F0_0001 CGP 22:19351368-19448232

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092360 C8H22orf39 chromosome 22 open reading frame 39 protein_coding Danio_rerio
ENSMUSG00000071632 2510002D24Rik RIKEN cDNA 2510002D24 gene protein_coding Mus_musculus
ENSMUSG00000099908 RP23-357J7.8 predicted gene 28539 protein_coding Mus_musculus

Loading