C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000242485 MRPL20 9606 - 1:1401908-1407313 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344843 MRPL20-001 1401908-1407313 protein_coding
  ENST00000477686 MRPL20-005 1406249-1407235 processed_transcript
  ENST00000482352 MRPL20-003 1405109-1407290 protein_coding
  ENST00000487659 MRPL20-002 1401913-1407268 retained_intron
  ENST00000492508 MRPL20-004 1402182-1406998 protein_coding
  ENST00000493287 MRPL20-006 1401913-1406307 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344843ENST00000487659ENST00000492508ENST00000493287
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344843 63.175±0.00 108.244±0.00 18.914±0.00 50.828±18.78 48.900±38.49 39.220±25.35 37.704±23.55 48.639±11.85 39.881±21.53 29.440±16.96 60.910±29.79 132.244±71.06 87.315±15.52 65.222±6.80
ENST00000487659 N/A N/A N/A N/A 1.882±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492508 N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.459±0.00 N/A N/A N/A N/A
ENST00000493287 N/A N/A N/A 26.030±0.00 N/A 6.581±0.00 8.004±0.00 N/A 13.333±0.00 N/A 24.502±0.00 12.097±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005761 IDA mitochondrial ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090462 mrpl20 mitochondrial ribosomal protein L20 protein_coding Danio_rerio
ENSMUSG00000029066 Mrpl20 mitochondrial ribosomal protein L20 protein_coding Mus_musculus

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