C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344843 MRPL20-001 ENSG00000242485 9606 - 1:1401908-1407313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344843 63.175±0.00 108.244±0.00 18.914±0.00 50.828±18.78 48.900±38.49 39.220±25.35 37.704±23.55 48.639±11.85 39.881±21.53 29.440±16.96 60.910±29.79 132.244±71.06 87.315±15.52 65.222±6.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005761 IDA mitochondrial ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137487 Mrpl20-002 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000030942 Mrpl20-001 protein_coding Mus_musculus 0 407
ENSMUST00000143503 Mrpl20-003 processed_transcript Mus_musculus 0 324
ENSMUST00000185148 Mrpl20-005 protein_coding Mus_musculus 0 267
ENSMUST00000130188 Mrpl20-004 protein_coding Mus_musculus 0 213

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