C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029066 Mrpl20 10090 + 4:155802878-155809975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030942 Mrpl20-001 155803521-155808831 protein_coding
  ENSMUST00000130188 Mrpl20-004 155803652-155807477 protein_coding
  ENSMUST00000137487 Mrpl20-002 155803650-155809975 nonsense_mediated_decay
  ENSMUST00000143503 Mrpl20-003 155803759-155808794 processed_transcript
  ENSMUST00000184339 Mrpl20-006 155802878-155803642 processed_transcript
  ENSMUST00000185148 Mrpl20-005 155803647-155808798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030942ENSMUST00000137487ENSMUST00000143503ENSMUST00000185148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030942 71.402±13.91 46.503±11.02 24.455±2.91 31.658±7.16 34.695±11.02 34.253±3.42 27.408±6.17 59.055±1.39 30.983±12.08 30.255±2.64 27.207±5.60 28.748±10.45 26.983±14.67 63.637±4.29
ENSMUST00000137487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.321±0.31 10.951±0.00 N/A
ENSMUST00000143503 N/A N/A 50.955±11.69 34.474±16.82 18.279±0.00 N/A 6.082±1.03 N/A 86.912±19.67 N/A 10.951±3.88 38.611±12.76 41.819±15.98 27.787±4.00
ENSMUST00000185148 N/A N/A N/A 34.177±0.00 N/A N/A N/A N/A N/A N/A N/A 40.674±0.00 54.934±33.89 59.643±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005761 ISS mitochondrial ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090462 mrpl20 mitochondrial ribosomal protein L20 protein_coding Danio_rerio
ENSG00000242485 MRPL20 mitochondrial ribosomal protein L20 protein_coding Homo_sapiens

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