C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule associated monooxygenase, calponin and LIM domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000243156 MICAL3 9606 - 22:17787649-18024559 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252134 MICAL3-014 17790540-17791667 retained_intron
  ENST00000383094 MICAL3-001 17841675-17906827 protein_coding
  ENST00000400561 MICAL3-003 17834328-17906835 protein_coding
  ENST00000414725 MICAL3-002 17839951-17906812 protein_coding
  ENST00000424046 MICAL3-006 17904728-18001180 protein_coding
  ENST00000441493 MICAL3-010 17787649-18024559 protein_coding
  ENST00000461307 MICAL3-004 17860163-17895288 protein_coding
  ENST00000462645 MICAL3-008 17865924-17876703 processed_transcript
  ENST00000465886 MICAL3-007 17871930-17876872 processed_transcript
  ENST00000495076 MICAL3-005 17839592-18001501 nonsense_mediated_decay
  ENST00000498345 MICAL3-009 17871934-17876739 processed_transcript
  ENST00000498573 MICAL3-011 17819022-17832000 protein_coding
  ENST00000577821 MICAL3-015 17790946-17817489 protein_coding
  ENST00000578905 MICAL3-016 17839951-17842482 retained_intron
  ENST00000578984 MICAL3-017 17819036-17831927 protein_coding
  ENST00000579997 MICAL3-019 17791264-17817425 protein_coding
  ENST00000580469 MICAL3-013 17790837-17815669 processed_transcript
  ENST00000584751 MICAL3-018 17803554-17810736 protein_coding
  ENST00000585038 MICAL3-012 17864615-17906874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000383094ENST00000441493ENST00000461307ENST00000585038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000383094 N/A N/A N/A 1.488±0.00 2.810±0.00 N/A N/A N/A 1.847±0.00 1.982±0.00 N/A 4.144±0.00 N/A N/A
ENST00000441493 2.695±0.00 5.570±0.00 N/A 4.803±3.46 2.146±1.09 1.994±0.52 2.994±2.40 1.135±0.46 2.004±0.00 2.019±0.00 N/A 4.848±2.75 2.704±0.40 6.157±1.14
ENST00000461307 N/A N/A 1.547±0.00 N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A 2.681±0.00 0.906±0.09 5.853±0.00
ENST00000585038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.910±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z7 CIL_0002Z7_0001 CGP 22:17734138-18024559
CIL_000240 CIL_000240_0001 CGP 22:17787649-18131138

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006887 IEA exocytosis
GO:0007010 IDA cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0016709 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0030042 ISS actin filament depolymerization
GO:0055114 ISS oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094732 mical3b microtubule associated monooxygenase, calponin and LIM domain containing 3b protein_coding Danio_rerio
ENSMUSG00000003178 Mical3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein_coding Mus_musculus
ENSMUSG00000051586 Mical3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein_coding Mus_musculus

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