C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Z7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000015475-ENSG00000243156 CGP 9606 22:17734138-18024559
GeneTranscriptPositionBiotype
ENSG00000093100 (XXbac-B461K10.4)
 ENST00000476405 (XXbac-B461K10.4-002) 17787652-17811497 retained_intron
ENSG00000207780 (MIR648)
microRNA 648 		ENST00000385046 (MIR648-201) 17980868-17980961 miRNA
ENSG00000234913 (XXbac-B476C20.13)
 ENST00000441167 (XXbac-B476C20.13-001) 18004270-18007308 sense_intronic
ENSG00000235445 (XXbac-B476C20.14)
 ENST00000429618 (XXbac-B476C20.14-001) 17983205-17983619 sense_intronic
ENSG00000237446 (RHEBP3)
Ras-homolog enriched in brain pseudogene 3 		ENST00000411920 (RHEBP3-001) 18019214-18020200 processed_pseudogene
ENSG00000264757 (MIR3198-1)
microRNA 3198-1 		ENST00000583102 (MIR3198-1-201) 17764180-17764259 miRNA
ENSG00000269220 (LINC00528)
long intergenic non-protein coding RNA 528 		ENST00000600723 (LINC00528-001) 17777322-17779481 lincRNA
CIL_0002Z7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004446-ENSMUSG00000051586 CGP 10090 6:120891930-121003153
GeneTranscriptPositionBiotype
ENSMUSG00000004446 (Bid)
BH3 interacting domain death agonist 		ENSMUST00000004560 (Bid-001) 120892854-120916853 protein_coding
ENSMUST00000125915 (Bid-002) 120906998-120916803 processed_transcript
ENSMUST00000145948 (Bid-003) 120900222-120916798 protein_coding
ENSMUST00000160684 (Bid-004) 120891930-120916836 nonsense_mediated_decay
ENSMUST00000161594 (Bid-005) 120895618-120897568 retained_intron
ENSMUSG00000009112 (Bcl2l13)
BCL2-like 13 (apoptosis facilitator) 		ENSMUST00000009256 (Bcl2l13-201) 120836230-120892842 protein_coding
ENSMUSG00000051586 (Mical3)
microtubule associated monooxygenase, calponin and LIM domain containing 3 		ENSMUST00000098457 (Mical3-001) 120931707-121003152 protein_coding
ENSMUST00000124669 (Mical3-003) 120960012-120966118 processed_transcript
ENSMUST00000140854 (Mical3-006) 120934825-120935535 retained_intron
ENSMUST00000142924 (Mical3-005) 120950683-120957723 processed_transcript
ENSMUST00000150503 (Mical3-002) 120958343-121003153 protein_coding
ENSMUST00000151602 (Mical3-004) 120934781-120958635 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Z7_0001ENSG00000093100ENST00000476405ENSG00000207780ENST00000385046ENSG00000234913ENST00000441167ENSG00000235445ENST00000429618ENSG00000237446ENST00000411920ENSG00000264757ENST00000583102ENSG00000269220ENST00000600723CIL_0002Z7_0002ENSMUSG00000004446ENSMUST00000004560ENSMUST00000125915ENSMUST00000145948ENSMUST00000160684ENSMUST00000161594ENSMUSG00000009112ENSMUST00000009256ENSMUSG00000051586ENSMUST00000098457ENSMUST00000124669ENSMUST00000140854ENSMUST00000142924ENSMUST00000150503ENSMUST00000151602
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Z7_0001ENSG00000093100ENST00000476405ENSG00000207780ENST00000385046ENSG00000234913ENST00000441167ENSG00000235445ENST00000429618ENSG00000237446ENST00000411920ENSG00000264757ENST00000583102ENSG00000269220ENST00000600723CIL_0002Z7_0002ENSMUSG00000004446ENSMUST00000004560ENSMUST00000160684ENSMUSG00000009112ENSMUST00000009256ENSMUSG00000051586ENSMUST00000098457ENSMUST00000140854ENSMUST00000150503ENSMUST00000151602
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000093100 ENST00000476405 1.887±0.00 8.641±0.00 N/A N/A 3.808±1.29 N/A N/A 2.200±0.00 6.011±0.00 1.737±0.57 0.825±0.00 9.233±1.81 1.748±0.44 3.778±0.00
ENSG00000207780 ENST00000385046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.499±0.00 N/A 1.407±0.00
ENSG00000234913 ENST00000441167 0.041±0.00 0.158±0.00 0.277±0.00 0.085±0.01 0.276±0.24 0.157±0.10 0.113±0.00 0.157±0.04 0.138±0.12 0.107±0.09 0.042±0.00 0.119±0.10 0.040±0.00 0.122±0.09
ENSG00000235445 ENST00000429618 N/A 0.333±0.00 N/A 0.476±0.37 0.388±0.00 0.163±0.03 0.355±0.21 0.100±0.00 0.090±0.00 N/A N/A 0.178±0.00 N/A 0.066±0.02
ENSG00000237446 ENST00000411920 N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A 0.065±0.00
ENSG00000264757 ENST00000583102 N/A 1.632±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269220 ENST00000600723 0.143±0.00 1.089±0.00 N/A 0.075±0.00 0.173±0.14 0.031±0.02 0.009±0.00 0.161±0.00 0.058±0.00 0.610±0.00 N/A 0.098±0.01 0.094±0.02 0.144±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004446 ENSMUST00000004560 N/A N/A 3.398±0.00 N/A N/A N/A N/A 18.191±2.98 4.968±0.12 N/A N/A N/A 5.941±0.19 N/A
ENSMUST00000125915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160684 6.747±0.59 5.059±0.00 5.349±0.08 6.429±2.47 7.142±0.75 5.311±0.57 N/A 12.519±1.29 8.045±3.97 3.263±0.31 N/A 6.602±1.19 4.436±1.48 2.167±0.22
ENSMUST00000161594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000009112 ENSMUST00000009256 12.518±2.36 12.599±1.81 4.322±0.14 6.067±1.60 10.776±2.05 6.756±0.97 10.993±0.55 7.399±0.37 9.229±2.97 6.450±0.39 11.470±0.61 8.957±2.28 7.056±1.60 5.201±1.66
ENSMUSG00000051586 ENSMUST00000098457 2.028±0.00 4.111±1.74 2.568±0.00 6.385±4.01 1.490±0.42 1.266±0.05 4.763±1.69 2.209±1.63 0.531±0.22 1.405±0.00 0.946±0.00 3.372±0.56 2.651±1.65 1.809±0.45
ENSMUST00000124669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.078±0.00
ENSMUST00000142924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.864±0.00 N/A N/A
ENSMUST00000151602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.087±0.00 N/A N/A

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