C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HOXA distal transcript antisense RNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000243766 HOTTIP 9606 + 7:27198575-27207259 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000421733 HOTTIP-002 27198575-27201236 antisense
  ENST00000472494 HOTTIP-005 27200437-27202822 antisense
  ENST00000521028 HOTTIP-001 27201842-27207259 antisense
  ENST00000605136 HOTTIP-003 27200437-27201823 antisense
  ENST00000614457 HOTTIP-006 27200421-27201687 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000421733ENST00000472494ENST00000521028ENST00000614457
Transcript ID Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000421733 0.529±0.00 N/A 0.050±0.00 N/A N/A 0.408±0.00 N/A N/A
ENST00000472494 N/A 1.084±0.00 N/A N/A N/A 0.031±0.00 N/A N/A
ENST00000521028 0.010±0.00 N/A N/A 0.005±0.00 0.014±0.00 0.036±0.01 0.374±0.15 0.005±0.00
ENST00000614457 N/A N/A N/A N/A N/A 0.257±0.00 N/A 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003P8 CIL_0003P8_0001 CGP 7:27181510-27200106
CIL_0003P5 CIL_0003P5_0001 CGP 7:27193503-27247176

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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