C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 900
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000246100 LINC00900 9606 - 11:115754248-115760627 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000499809 LINC00900-001 115754248-115760194 lincRNA
  ENST00000501294 LINC00900-002 115757451-115760627 lincRNA
  ENST00000514294 LINC00900-003 115757463-115760197 lincRNA
  ENST00000535683 LINC00900-004 115757920-115760200 lincRNA
  ENST00000537070 LINC00900-005 115757717-115760186 lincRNA
  ENST00000602803 LINC00900-006 115758276-115758853 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499809ENST00000501294ENST00000514294ENST00000537070
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499809 0.140±0.00 0.376±0.00 0.117±0.00 0.065±0.01 0.051±0.00 0.077±0.00 0.097±0.07 0.104±0.02 0.007±0.00 0.260±0.17 0.166±0.01 N/A
ENST00000501294 0.130±0.00 0.499±0.00 N/A N/A N/A N/A N/A 0.239±0.00 N/A 0.394±0.00 0.270±0.00 N/A
ENST00000514294 N/A 0.325±0.00 0.214±0.00 0.047±0.00 0.113±0.00 0.417±0.00 0.248±0.20 N/A 0.208±0.00 0.147±0.00 0.242±0.00 0.391±0.00
ENST00000537070 N/A N/A 0.664±0.00 0.107±0.00 N/A N/A N/A N/A N/A 0.170±0.00 0.414±0.00 0.793±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080B CIL_00080B_0001 VISTA 11:115352903-115953688
CIL_000803 CIL_000803_0001 VISTA 11:115443250-116048688
CIL_0007JB CIL_0007JB_0007 UCNEbase 11:115489207-116083402

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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