C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | ATP5J2-PTCD1 readthrough | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000248919  |
ATP5J2-PTCD1 | 9606 | - |
7:99419749-99466197  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000413834 |
ATP5J2-PTCD1-001 | 99419749-99466164 | protein_coding | ||
| ENST00000437572 |
ATP5J2-PTCD1-003 | 99435031-99466197 | processed_transcript | ||
| ENST00000451138 |
ATP5J2-PTCD1-002 | 99435178-99466162 | nonsense_mediated_decay | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004TK | CIL_0004TK_0001 | CGP | 7:99408641-99466163 |
| CIL_0004TL | CIL_0004TL_0001 | CGP | 7:99419749-99466197 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000049 | IDA | tRNA binding |
| GO:0005739 | IDA | mitochondrion |
| GO:0005759 | ISS | mitochondrial matrix |
| GO:0042780 | IDA | tRNA 3'-end processing |
| GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000076176
|
ptcd1 | pentatricopeptide repeat domain 1 | protein_coding | Danio_rerio | |
|
ENSMUSG00000029624
|
Ptcd1 | pentatricopeptide repeat domain 1 | protein_coding | Mus_musculus | |
