C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004TK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106245-ENSG00000106246 CGP 9606 7:99408641-99466163
GeneTranscriptPositionBiotype
ENSG00000106244 (PDAP1)
PDGFA associated protein 1 		ENST00000350498 (PDAP1-001) 99394963-99408829 protein_coding
ENST00000426447 (PDAP1-002) 99396523-99408590 nonsense_mediated_decay
ENST00000488214 (PDAP1-003) 99403317-99404942 retained_intron
ENST00000496335 (PDAP1-004) 99392048-99397960 processed_transcript
ENSG00000106245 (BUD31)
BUD31 homolog (S. cerevisiae) 		ENST00000222969 (BUD31-001) 99408978-99419608 protein_coding
ENST00000403633 (BUD31-002) 99408641-99419616 protein_coding
ENST00000427499 (BUD31-006) 99408672-99416200 nonsense_mediated_decay
ENST00000431419 (BUD31-005) 99415136-99419577 protein_coding
ENST00000456893 (BUD31-003) 99411057-99419612 protein_coding
ENST00000466798 (BUD31-004) 99416134-99418121 retained_intron
ENST00000471813 (BUD31-008) 99410114-99416299 retained_intron
ENST00000473447 (BUD31-007) 99409085-99411246 retained_intron
ENST00000496696 (BUD31-009) 99408969-99417598 retained_intron
CIL_0004TK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038722-ENSMUSG00000029624 CGP 10090 5:145140362-145167108
GeneTranscriptPositionBiotype
ENSMUSG00000029624 (Ptcd1)
pentatricopeptide repeat domain 1 		ENSMUST00000031628 (Ptcd1-001) 145147514-145167108 protein_coding
ENSMUST00000161390 (Ptcd1-002) 145165448-145166956 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TK_0001ENSG00000106244ENST00000350498ENST00000426447ENST00000488214ENST00000496335ENSG00000106245ENST00000222969ENST00000403633ENST00000427499ENST00000431419ENST00000456893ENST00000466798ENST00000471813ENST00000473447ENST00000496696CIL_0004TK_0002ENSMUSG00000029624ENSMUST00000031628ENSMUST00000161390
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TK_0001ENSG00000106244ENST00000350498ENST00000426447ENSG00000106245ENST00000222969ENST00000403633ENST00000471813CIL_0004TK_0002ENSMUSG00000029624ENSMUST00000031628
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106244 ENST00000350498 47.421±0.00 90.184±0.00 4.672±0.00 6.794±0.00 25.935±16.36 8.773±0.00 13.036±10.19 21.324±17.01 12.500±7.38 36.879±0.00 25.348±17.86 70.872±43.11 57.279±6.18 33.804±0.00
ENST00000426447 N/A N/A N/A N/A N/A N/A N/A 10.132±0.00 10.643±0.00 N/A N/A 212.331±0.00 89.114±0.00 46.976±0.00
ENST00000488214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000106245 ENST00000222969 N/A N/A N/A 14.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 76.889±0.00
ENST00000403633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 225.965±0.00 83.733±0.00 78.873±0.00
ENST00000427499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 154.199±0.00
ENST00000473447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029624 ENSMUST00000031628 6.827±1.04 8.816±0.99 7.335±0.73 6.644±0.57 6.109±1.81 6.360±0.72 5.076±1.34 7.139±1.42 5.406±1.73 4.289±1.59 5.229±0.64 10.190±1.40 12.413±4.96 6.954±1.50
ENSMUST00000161390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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