C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 1234
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000249550 LINC01234 9606 - 12:113679459-113773683 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000510694 LINC01234-001 113751014-113773639 lincRNA
  ENST00000547963 LINC01234-002 113744577-113773683 lincRNA
  ENST00000550223 LINC01234-005 113745704-113773663 lincRNA
  ENST00000550905 LINC01234-006 113679459-113773681 lincRNA
  ENST00000551982 LINC01234-004 113737448-113767209 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000510694ENST00000547963ENST00000550223ENST00000550905
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000510694 0.095±0.00 0.215±0.00 N/A 0.020±0.00 N/A 0.046±0.00 0.127±0.00 0.043±0.00 0.080±0.00 N/A 0.138±0.13 N/A 0.187±0.00
ENST00000547963 0.019±0.00 0.044±0.00 0.355±0.04 0.032±0.00 0.029±0.00 0.006±0.00 N/A N/A N/A N/A 0.011±0.00 0.036±0.02 N/A
ENST00000550223 N/A N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A N/A 0.846±0.00 0.052±0.00 N/A
ENST00000550905 0.084±0.00 0.120±0.00 N/A N/A 0.029±0.00 0.081±0.00 N/A N/A 0.141±0.00 0.076±0.00 N/A 0.087±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000842 CIL_000842_0001 VISTA 12:113363390-113966000
CIL_000875 CIL_000875_0001 VISTA 12:113632311-114233611
CIL_0008LK CIL_0008LK_0001 VISTA 12:113632321-114234251

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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