C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C15orf38-AP3S2 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000250021 C15orf38-AP3S2 9606 - 15:89834308-89912882 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398333 C15orf38-AP3S2-001 89834308-89912882 protein_coding
  ENST00000558648 C15orf38-AP3S2-007 89837622-89908399 protein_coding
  ENST00000559629 C15orf38-AP3S2-006 89837622-89908413 protein_coding
  ENST00000560224 C15orf38-AP3S2-002 89865461-89903365 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398333 13.072±0.00 9.201±0.00 4.617±0.00 6.672±3.55 7.297±4.82 7.272±2.90 5.563±4.16 10.297±0.00 5.858±2.12 4.500±2.96 10.028±0.00 8.554±4.61 10.172±4.14 10.710±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000594 CIL_000594_0001 CGP 15:89784889-89894638
CIL_0007EL CIL_0007EL_0001 CGP 15:89830599-89912882

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041085 C18H15orf38 C15orf38-AP3S2 readthrough protein_coding Danio_rerio
ENSMUSG00000039043 2610034B18Rik RIKEN cDNA 2610034B18 gene protein_coding Mus_musculus

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