C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000594_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166825-ENSG00000157823 CGP 9606 15:89784889-89894638
GeneTranscriptPositionBiotype
ENSG00000157823 (AP3S2)
adaptor-related protein complex 3, sigma 2 subunit 		ENST00000336418 (AP3S2-001) 89830599-89894342 protein_coding
ENST00000423566 (AP3S2-013) 89834982-89893977 nonsense_mediated_decay
ENST00000557999 (AP3S2-005) 89835568-89893994 nonsense_mediated_decay
ENST00000558011 (AP3S2-009) 89835440-89893994 protein_coding
ENST00000558186 (AP3S2-011) 89837618-89852656 processed_transcript
ENST00000558806 (AP3S2-006) 89835594-89894028 nonsense_mediated_decay
ENST00000558926 (AP3S2-012) 89835424-89837954 retained_intron
ENST00000558999 (AP3S2-008) 89837615-89893994 nonsense_mediated_decay
ENST00000559162 (AP3S2-004) 89835600-89888653 retained_intron
ENST00000559601 (AP3S2-003) 89888521-89889479 retained_intron
ENST00000560184 (AP3S2-002) 89865459-89893970 processed_transcript
ENST00000560251 (AP3S2-010) 89865613-89893977 nonsense_mediated_decay
ENST00000560771 (AP3S2-016) 89835566-89845774 processed_transcript
ENST00000560940 (AP3S2-014) 89835480-89893981 protein_coding
ENST00000561410 (AP3S2-015) 89835597-89849007 processed_transcript
ENST00000617003 (AP3S2-017) 89893078-89894638 protein_coding
ENSG00000166825 (ANPEP)
alanyl (membrane) aminopeptidase 		ENST00000300060 (ANPEP-001) 89784889-89814862 protein_coding
ENST00000558177 (ANPEP-008) 89797575-89802736 processed_transcript
ENST00000558740 (ANPEP-009) 89790953-89793187 retained_intron
ENST00000559761 (ANPEP-006) 89797445-89799560 retained_intron
ENST00000559874 (ANPEP-002) 89806273-89815401 protein_coding
ENST00000559887 (ANPEP-007) 89803985-89804851 retained_intron
ENST00000560028 (ANPEP-004) 89804277-89805372 nonsense_mediated_decay
ENST00000560030 (ANPEP-005) 89797659-89803969 nonsense_mediated_decay
ENST00000560137 (ANPEP-003) 89806401-89814864 protein_coding
ENSG00000250021 (C15orf38-AP3S2)
C15orf38-AP3S2 readthrough 		ENST00000398333 (C15orf38-AP3S2-001) 89834308-89912882 protein_coding
ENST00000558648 (C15orf38-AP3S2-007) 89837622-89908399 protein_coding
ENST00000559629 (C15orf38-AP3S2-006) 89837622-89908413 protein_coding
ENST00000560224 (C15orf38-AP3S2-002) 89865461-89903365 processed_transcript
ENSG00000259677 (RP11-493E3.1)
 ENST00000559166 (RP11-493E3.1-001) 89876540-89877285 processed_pseudogene
ENSG00000264796 (MIR5009)
microRNA 5009 		ENST00000578736 (MIR5009-201) 89883931-89884030 miRNA
ENSG00000264966 (MIR5094)
microRNA 5094 		ENST00000578766 (MIR5094-201) 89850637-89850721 miRNA
CIL_000594_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039062-ENSMUSG00000063801 CGP 10090 7:79821803-79920640
GeneTranscriptPositionBiotype
ENSMUSG00000039062 (Anpep)
alanyl (membrane) aminopeptidase 		ENSMUST00000049004 (Anpep-201) 79821804-79842352 protein_coding
ENSMUST00000107392 (Anpep-001) 79821803-79848210 protein_coding
ENSMUST00000149164 (Anpep-002) 79842614-79848193 processed_transcript
ENSMUSG00000063801 (Ap3s2)
adaptor-related protein complex 3, sigma 2 subunit 		ENSMUST00000075657 (Ap3s2-201) 79875332-79920640 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000594_0001ENSG00000157823ENST00000336418ENST00000423566ENST00000560940ENSG00000166825ENST00000300060ENST00000558177ENST00000558740ENST00000560030ENSG00000250021ENST00000398333ENSG00000259677ENST00000559166ENSG00000264796ENST00000578736ENSG00000264966ENST00000578766CIL_000594_0002ENSMUSG00000039062ENSMUST00000049004ENSMUST00000107392ENSMUSG00000063801ENSMUST00000075657
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157823 ENST00000336418 N/A 3.165±0.00 1.085±0.00 2.113±0.00 N/A N/A 4.109±2.75 5.451±2.56 2.180±0.11 2.564±0.00 4.706±1.03 2.252±0.93 3.301±0.76 4.717±0.40
ENST00000423566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.342±0.00 N/A N/A
ENST00000557999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560940 N/A N/A N/A N/A N/A N/A 7.990±0.00 25.044±0.00 N/A 10.734±0.00 N/A N/A N/A N/A
ENST00000561410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166825 ENST00000300060 23.498±0.00 1.106±0.00 28.273±0.00 0.226±0.00 8.865±7.88 12.923±8.71 1.658±0.00 34.268±20.16 25.251±24.17 3.915±3.43 0.197±0.12 5.305±3.92 19.820±6.49 1.546±1.13
ENST00000558177 N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A 1.711±0.00 N/A N/A 0.717±0.00
ENST00000558740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.722±0.00 N/A N/A
ENST00000559761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560030 N/A N/A N/A N/A N/A 15.902±0.00 N/A N/A N/A N/A 0.491±0.00 22.757±0.00 22.694±0.00 N/A
ENST00000560137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250021 ENST00000398333 13.072±0.00 9.201±0.00 4.617±0.00 6.672±3.55 7.297±4.82 7.272±2.90 5.563±4.16 10.297±0.00 5.858±2.12 4.500±2.96 10.028±0.00 8.554±4.61 10.172±4.14 10.710±2.50
ENST00000558648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259677 ENST00000559166 0.028±0.00 N/A N/A 0.043±0.00 0.083±0.01 0.013±0.00 0.070±0.00 0.057±0.00 N/A 0.572±0.00 N/A 0.053±0.03 N/A 0.015±0.00
ENSG00000264796 ENST00000578736 N/A 0.352±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264966 ENST00000578766 1.722±0.00 N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039062 ENSMUST00000049004 36.285±28.07 0.755±0.03 6.102±0.54 0.912±0.23 9.881±6.62 1.009±0.19 1.834±0.50 44.578±3.02 18.704±9.99 3.776±0.99 0.603±0.17 11.511±6.35 2.701±1.53 0.173±0.10
ENSMUST00000107392 47.396±39.81 2.088±0.23 3.152±1.10 0.773±0.51 14.772±4.73 4.806±1.09 3.494±0.53 4.324±0.00 1.842±0.65 17.082±0.77 0.412±0.19 17.615±5.26 1.169±0.68 0.274±0.10
ENSMUST00000149164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063801 ENSMUST00000075657 7.670±0.94 13.342±4.18 6.990±0.98 13.171±6.40 8.235±1.74 6.436±3.36 5.828±0.44 9.322±1.05 6.076±0.58 7.362±2.67 7.101±0.29 10.636±4.43 3.436±1.54 2.432±1.13

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