C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 260
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000254004 ZNF260 9606 - 19:36510695-36528660 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000520608 ZNF260-002 36525091-36528265 retained_intron
  ENST00000523638 ZNF260-001 36510695-36528660 protein_coding
  ENST00000588993 ZNF260-004 36511779-36525299 protein_coding
  ENST00000592282 ZNF260-003 36511028-36528268 protein_coding
  ENST00000593142 ZNF260-005 36511779-36525299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000523638ENST00000592282ENST00000593142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000523638 0.641±0.00 1.171±0.00 0.454±0.00 2.415±0.36 0.842±0.00 1.059±0.38 0.483±0.00 N/A 1.584±0.00 1.794±0.00 N/A 2.610±0.58 1.405±0.10 1.769±0.57
ENST00000592282 0.839±0.00 0.656±0.00 1.389±0.00 N/A 1.036±0.00 N/A 0.761±0.00 1.329±0.00 N/A N/A N/A N/A N/A N/A
ENST00000593142 N/A N/A N/A N/A 1.495±0.00 N/A N/A 0.479±0.00 1.295±0.00 N/A 0.153±0.00 1.168±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000465 CIL_000465_0001 CGP 19:36445119-36528660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086417 CABZ01069022.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087185 CABZ01069006.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090209 si:dkey-25i10.1 si:dkey-25i10.1 protein_coding Danio_rerio
ENSDARG00000095121 CR382372.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096141 zgc:173624 zgc:173624 protein_coding Danio_rerio
ENSDARG00000096828 si:ch73-144d13.7 si:ch73-144d13.7 protein_coding Danio_rerio
ENSDARG00000097620 si:ch211-210b2.1 si:ch211-210b2.1 protein_coding Danio_rerio
ENSDARG00000098031 si:ch73-144d13.8 si:ch73-144d13.8 protein_coding Danio_rerio
ENSMUSG00000049421 Zfp260 zinc finger protein 260 protein_coding Mus_musculus

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