C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000259439 RP11-89K21.1 9606 - 2:44921077-44939199 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430847 RP11-89K21.1-004 44929977-44935359 lincRNA
  ENST00000432125 RP11-89K21.1-005 44923035-44935644 lincRNA
  ENST00000437916 RP11-89K21.1-001 44921077-44939199 lincRNA
  ENST00000444871 RP11-89K21.1-003 44931122-44938888 lincRNA
  ENST00000560399 RP11-89K21.1-002 44921077-44923039 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyOvaryPlacentaTestisENST00000430847ENST00000432125ENST00000437916ENST00000444871ENST00000560399
Transcript ID Brain Breast Kidney Ovary Placenta Testis
ENST00000430847 N/A N/A N/A 1.297±1.11 N/A 0.052±0.00
ENST00000432125 0.041±0.00 N/A N/A 0.304±0.00 0.037±0.00 N/A
ENST00000437916 N/A 0.040±0.00 0.080±0.00 0.222±0.13 N/A 0.031±0.00
ENST00000444871 N/A N/A 0.263±0.00 0.274±0.00 N/A 0.150±0.00
ENST00000560399 0.438±0.00 N/A N/A 0.100±0.00 N/A 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NM CIL_0001NM_0001 CGP 2:44361950-44946077
CIL_0007KD CIL_0007KD_0001 UCNEbase 2:44450120-45456944
CIL_00083B CIL_00083B_0001 VISTA 2:44503430-45105600
CIL_0009CD CIL_0009CD_0001 VISTA 2:44539613-45143485
CIL_0009CC CIL_0009CC_0001 VISTA 2:44579788-45180514
CIL_0007WX CIL_0007WX_0001 VISTA 2:44600956-45202178

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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