C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FOXF1 adjacent non-coding developmental regulatory RNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000268388 FENDRR 9606 - 16:86474529-86509099 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000593604 FENDRR-007 86490268-86508877 lincRNA
  ENST00000594398 FENDRR-004 86490226-86498585 lincRNA
  ENST00000595886 FENDRR-003 86474529-86508860 lincRNA
  ENST00000597578 FENDRR-006 86490183-86508876 lincRNA
  ENST00000598996 FENDRR-002 86487706-86490879 lincRNA
  ENST00000599749 FENDRR-001 86487737-86509099 lincRNA
  ENST00000600553 FENDRR-005 86477124-86490881 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000593604ENST00000594398ENST00000595886ENST00000598996ENST00000599749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000593604 N/A N/A N/A N/A 2.637±0.00 N/A N/A 0.076±0.00 N/A N/A N/A 0.929±0.00 0.258±0.00
ENST00000594398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00
ENST00000595886 0.017±0.00 0.252±0.00 N/A 0.117±0.01 0.034±0.00 4.172±0.00 0.007±0.00 0.026±0.00 1.588±1.48 3.044±0.00 0.295±0.15 0.423±0.02 0.049±0.02
ENST00000598996 N/A 0.196±0.00 0.131±0.00 0.177±0.00 2.014±0.00 5.280±3.11 0.028±0.00 0.235±0.00 4.705±0.00 4.620±1.43 0.323±0.23 1.091±0.33 N/A
ENST00000599749 N/A N/A N/A N/A N/A N/A N/A N/A 1.178±1.12 3.702±0.00 N/A 0.778±0.43 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YG CIL_0000YG_0002 CGP 16:85898803-86515418
CIL_0008L5 CIL_0008L5_0001 VISTA 16:86096481-86697120
CIL_0008XN CIL_0008XN_0001 VISTA 16:86335014-86936242

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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