C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIH, polypeptide 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000272047 GTF2H5 9606 + 6:158168352-158199344 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000607778 GTF2H5-001 158168352-158199344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000607778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000607778 2.222±0.00 2.437±0.00 0.440±0.00 3.041±1.29 1.940±1.63 1.529±1.31 0.945±0.59 1.156±0.85 0.908±0.04 0.647±0.37 1.353±0.50 2.270±0.92 1.400±0.17 3.475±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055L CIL_00055L_0001 CGP 6:158109515-158199344
CIL_0004W3 CIL_0004W3_0001 CGP 6:158168352-158511828

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000182 IEA rDNA binding
GO:0000439 IEA core TFIIH complex
GO:0005730 IEA nucleolus
GO:0006289 IMP:IEA nucleotide-excision repair
GO:0006294 IEA nucleotide-excision repair, preincision complex assembly
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006362 IEA transcription elongation from RNA polymerase I promoter
GO:0006364 IEA rRNA processing
GO:0071480 IEA cellular response to gamma radiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056099 gtf2h5 general transcription factor IIH, polypeptide 5 protein_coding Danio_rerio
ENSMUSG00000034345 Gtf2h5 general transcription factor IIH, polypeptide 5 protein_coding Mus_musculus

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