C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD24 molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000272398 CD24 9606 - 6:106969831-106975627 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000606017 CD24-201 106969833-106974755 protein_coding
  ENST00000610952 CD24-002 106971469-106975627 protein_coding
  ENST00000615659 CD24-004 106971003-106975327 protein_coding
  ENST00000619133 CD24-001 106969831-106975465 protein_coding
  ENST00000619869 CD24-003 106971360-106975459 protein_coding
  ENST00000620405 CD24-006 106971094-106974732 protein_coding
  ENST00000621311 CD24-005 106973387-106975162 processed_transcript
  ENST00000622315 CD24-007 106971380-106974039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000606017ENST00000610952ENST00000615659ENST00000619133ENST00000619869ENST00000620405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000606017 8.208±0.00 26.347±0.00 75.958±0.00 6.776±2.44 40.102±4.25 144.339±95.19 0.384±0.28 287.083±283.93 7.050±1.79 36.712±27.20 0.314±0.16 69.546±33.00 51.082±16.02 13.773±0.00
ENST00000610952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.807±0.59 N/A N/A N/A
ENST00000615659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.306±0.00
ENST00000619133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.633±0.00 N/A
ENST00000619869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.843±0.00
ENST00000620405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 75.741±0.00 30.544±0.00 0.387±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PN CIL_0008PN_0001 VISTA 6:106445731-107046322
CIL_00085F CIL_00085F_0001 VISTA 6:106472954-107074777

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001959 IEA regulation of cytokine-mediated signaling pathway
GO:0002237 IEA response to molecule of bacterial origin
GO:0002329 IEA pre-B cell differentiation
GO:0002523 IEA leukocyte migration involved in inflammatory response
GO:0002842 IEA positive regulation of T cell mediated immune response to tumor cell
GO:0002863 IEA positive regulation of inflammatory response to antigenic stimulus
GO:0002904 IEA positive regulation of B cell apoptotic process
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006955 IEA immune response
GO:0007155 IEA cell adhesion
GO:0007157 IEA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 IEA leukocyte cell-cell adhesion
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007274 IEA neuromuscular synaptic transmission
GO:0007406 IEA negative regulation of neuroblast proliferation
GO:0008637 IEA apoptotic mitochondrial changes
GO:0009897 IEA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0010976 IEA positive regulation of neuron projection development
GO:0016477 IEA cell migration
GO:0022407 IEA regulation of cell-cell adhesion
GO:0022409 IEA positive regulation of cell-cell adhesion
GO:0030246 IEA carbohydrate binding
GO:0030262 IEA apoptotic nuclear changes
GO:0030889 IEA negative regulation of B cell proliferation
GO:0031175 IEA neuron projection development
GO:0031362 IEA anchored component of external side of plasma membrane
GO:0031528 IEA microvillus membrane
GO:0032600 IEA chemokine receptor transport out of membrane raft
GO:0033625 IEA positive regulation of integrin activation
GO:0033630 IEA positive regulation of cell adhesion mediated by integrin
GO:0033632 IEA regulation of cell-cell adhesion mediated by integrin
GO:0033634 IEA positive regulation of cell-cell adhesion mediated by integrin
GO:0034107 IEA negative regulation of erythrocyte clearance
GO:0034109 IEA homotypic cell-cell adhesion
GO:0034119 IEA negative regulation of erythrocyte aggregation
GO:0042103 IEA positive regulation of T cell homeostatic proliferation
GO:0042632 IEA cholesterol homeostasis
GO:0045577 IEA regulation of B cell differentiation
GO:0045665 IEA negative regulation of neuron differentiation
GO:0046014 IEA negative regulation of T cell homeostatic proliferation
GO:0046641 IEA positive regulation of alpha-beta T cell proliferation
GO:0048488 IEA synaptic vesicle endocytosis
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0050768 IEA negative regulation of neurogenesis
GO:0050850 IEA positive regulation of calcium-mediated signaling
GO:0060170 IEA ciliary membrane
GO:0097190 IEA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000047139 Cd24a CD24a antigen protein_coding Mus_musculus

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