C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: INO80B-WBP1 readthrough (NMD candidate)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000274049 INO80B-WBP1 9606 + 2:74455088-74460884 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000441673 INO80B-WBP1-002 74455100-74460846 nonsense_mediated_decay
  ENST00000452361 INO80B-WBP1-001 74455088-74460884 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000441673ENST00000452361
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000441673 N/A 0.900±0.00 N/A 2.315±0.00 N/A 1.557±0.00 1.520±0.00 3.129±0.00 1.759±0.00 N/A 17.294±0.00 5.320±0.00 N/A
ENST00000452361 18.129±0.00 0.540±0.00 9.085±1.94 8.123±0.00 6.927±4.89 4.913±0.00 6.143±4.87 4.497±3.72 19.302±0.00 2.793±1.70 5.944±4.65 5.410±0.00 14.924±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IEA Ino80 complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062749 ino80b INO80 complex subunit B protein_coding Danio_rerio
ENSMUSG00000030034 Ino80b INO80 complex subunit B protein_coding Mus_musculus

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