C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80B-WBP1 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441673 INO80B-WBP1-002 ENSG00000274049 9606 + 2:74455100-74460846 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungOvaryPlacentaENST00000441673
Transcript ID Bladder Breast Heart Kidney Liver Lung Ovary Placenta
ENST00000441673 0.900±0.00 2.315±0.00 1.557±0.00 1.520±0.00 3.129±0.00 1.759±0.00 17.294±0.00 5.320±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006338 IEA chromatin remodeling
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IEA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131939 Wbp1-004 retained_intron Mus_musculus 0 893
ENSMUST00000113936 Wbp1-002 protein_coding Mus_musculus 0 893
ENSMUST00000032111 Wbp1-001 protein_coding Mus_musculus 0 893
ENSMUST00000146328 Wbp1-008 protein_coding Mus_musculus 0 830
ENSMUST00000113935 Ino80b-001 protein_coding Mus_musculus 0 821
ENSMUST00000032109 Ino80b-201 protein_coding Mus_musculus 0 752
ENSMUST00000143814 Ino80b-002 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000151393 Wbp1-003 retained_intron Mus_musculus 0 481
ENSMUST00000131936 Wbp1-006 processed_transcript Mus_musculus 0 424
ENSMUST00000142493 Wbp1-007 retained_intron Mus_musculus 0 414
ENSMUST00000123394 Wbp1-005 processed_transcript Mus_musculus 0 257
ENSDART00000044214 wbp1lb-001 protein_coding Danio_rerio 0.00000000002 75

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