C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 2, group E, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000278570 NR2E3 9606 + 15:71792638-71818259 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000563709 NR2E3-005 71817460-71818248 processed_transcript
  ENST00000617575 NR2E3-001 71810554-71818259 protein_coding
  ENST00000621098 NR2E3-002 71810592-71814929 protein_coding
  ENST00000621736 NR2E3-004 71792638-71818259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000563709ENST00000617575ENST00000621098ENST00000621736
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000563709 N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.558±0.00 0.221±0.00
ENST00000617575 0.063±0.00 0.137±0.00 0.163±0.00 0.122±0.00 0.157±0.00 0.127±0.00 0.191±0.00 0.017±0.00 0.139±0.00 0.025±0.00 0.061±0.02 0.145±0.00
ENST00000621098 N/A N/A N/A 0.021±0.00 0.245±0.00 N/A N/A N/A N/A N/A 0.030±0.00 0.246±0.00
ENST00000621736 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.264±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 TAS ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 TAS:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0007601 IEA visual perception
GO:0007602 TAS phototransduction
GO:0008270 IEA zinc ion binding
GO:0008285 IEA negative regulation of cell proliferation
GO:0010467 TAS gene expression
GO:0030522 TAS intracellular receptor signaling pathway
GO:0042462 IEA eye photoreceptor cell development
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045872 IEA positive regulation of rhodopsin gene expression
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0060041 IEA retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045904 nr2e3 nuclear receptor subfamily 2, group E, member 3 protein_coding Danio_rerio
ENSMUSG00000032292 Nr2e3 nuclear receptor subfamily 2, group E, member 3 protein_coding Mus_musculus

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