C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysine (K)-specific demethylase 5D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000278871 KDM5D 9606 - Y:19705995-19744534 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000623344 KDM5D-202 19705995-19744534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyMusclePlacentaTestisENST00000623344
Transcript ID Bladder Kidney Muscle Placenta Testis
ENST00000623344 1.112±0.00 0.728±0.00 0.838±0.00 1.881±0.00 3.110±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0032453 IDA histone demethylase activity (H3-K4 specific)
GO:0034720 IDA histone H3-K4 demethylation
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006124 kdm5c lysine (K)-specific demethylase 5C protein_coding Danio_rerio
ENSMUSG00000056673 Kdm5d lysine (K)-specific demethylase 5D protein_coding Mus_musculus

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