C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysine (K)-specific demethylase 5C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000006124 kdm5c 7955 + 8:38095710-38138758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000098657 kdm5c-201 38098175-38138756 protein_coding
  ENSDART00000127053 kdm5c-001 38095710-38138758 protein_coding
  ENSDART00000137864 kdm5c-002 38104423-38107427 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000098657ENSDART00000127053
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000098657 7.706±0.00 2.931±2.87 N/A 0.836±0.00 3.031±0.00
ENSDART00000127053 6.426±5.23 7.355±3.89 10.413±0.00 1.342±0.00 2.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062O CIL_00062O_0001 CGP 8:38060407-38138758

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000012817 KDM5D lysine (K)-specific demethylase 5D protein_coding Homo_sapiens
ENSG00000126012 KDM5C lysine (K)-specific demethylase 5C protein_coding Homo_sapiens
ENSG00000278871 KDM5D lysine (K)-specific demethylase 5D protein_coding Homo_sapiens
ENSG00000280101 AC010889.1 protein_coding Homo_sapiens
ENSG00000280358 AC010889.2 protein_coding Homo_sapiens
ENSMUSG00000025332 Kdm5c lysine (K)-specific demethylase 5C protein_coding Mus_musculus
ENSMUSG00000056673 Kdm5d lysine (K)-specific demethylase 5D protein_coding Mus_musculus

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