C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: malignant T cell amplified sequence 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000365 Mcts1-001 ENSMUSG00000000355 10090 + X:38600655-38613426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000365
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000365 6.034±1.07 1.886±0.00 28.453±6.52 19.643±11.08 3.842±1.62 1.262±0.70 4.412±1.19 3.693±0.33 11.940±7.42 3.527±0.18 23.590±1.11 6.399±7.68 11.491±4.99 0.646±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GD CIL_0000GD_0003 CGP X:38533274-38613426
CIL_0000GE CIL_0000GE_0003 CGP X:38600578-38635087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003743 IEA translation initiation factor activity
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006413 IEA translational initiation
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371315 MCTS1-002 protein_coding Homo_sapiens 0 894
ENST00000371317 MCTS1-001 protein_coding Homo_sapiens 0 1081
ENST00000394552 MCTS2P-001 processed_pseudogene Homo_sapiens 0 710
ENST00000479096 HM13-025 processed_transcript Homo_sapiens 0 283
ENST00000484481 MCTS1-006 processed_transcript Homo_sapiens 0 340
ENST00000487133 MCTS1-004 processed_transcript Homo_sapiens 0 614
ENST00000493274 MCTS1-003 processed_transcript Homo_sapiens 0 664
ENST00000493879 MCTS1-005 processed_transcript Homo_sapiens 0 340

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