Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000000560	Gabra2	10090	-	5:70961057-71095849	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000000572		Gabra2-201	70961057-71095849	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Muscle	Ovary	Placenta	Testis
ENSMUST00000000572	0.096±0.07	0.065±0.01	0.058±0.01	10.099±9.08	0.120±0.03	0.080±0.03	0.015±0.00	0.029±0.02	0.033±0.04	0.017±0.00	0.061±0.06	0.039±0.03	0.014±0.01

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002YX	CIL_0002YX_0002	CGP	5:70751047-71095849
CIL_0002YU	CIL_0002YU_0002	CGP	5:70961057-71548205

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0001505	IEA	regulation of neurotransmitter levels
GO:0004890	IEA	GABA-A receptor activity
GO:0005230	IEA	extracellular ligand-gated ion channel activity
GO:0005254	IEA	chloride channel activity
GO:0006836	IEA	neurotransmitter transport
GO:0007214	IEA	gamma-aminobutyric acid signaling pathway
GO:0008503	IEA	benzodiazepine receptor activity
GO:0030054	IEA	cell junction
GO:0030285	IEA	integral component of synaptic vesicle membrane
GO:0030424	IDA	axon
GO:0034707	IEA	chloride channel complex
GO:0045211	IEA	postsynaptic membrane
GO:1902476	IEA	chloride transmembrane transport

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000034011	CABZ01072856.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000070005	GABRA2 (2 of 4)	gamma-aminobutyric acid (GABA) A receptor, alpha 2	protein_coding	Danio_rerio
ENSG00000151834	GABRA2	gamma-aminobutyric acid (GABA) A receptor, alpha 2	protein_coding	Homo_sapiens

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