C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000563 Atp5f1 10090 - 3:105942698-105960099 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118209 Atp5f1-001 105942698-105960099 protein_coding
  ENSMUST00000123959 Atp5f1-004 105958591-105959246 retained_intron
  ENSMUST00000133320 Atp5f1-002 105942702-105959276 nonsense_mediated_decay
  ENSMUST00000143022 Atp5f1-005 105953827-105956006 retained_intron
  ENSMUST00000153666 Atp5f1-003 105953669-105959264 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118209ENSMUST00000133320ENSMUST00000153666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118209 62.762±6.25 N/A 68.926±13.06 63.417±0.46 55.888±20.78 63.477±10.39 215.632±58.51 164.298±33.70 145.007±26.31 37.686±4.72 284.944±9.48 N/A 106.281±26.07 42.556±0.97
ENSMUST00000133320 30.222±0.00 N/A 31.957±6.74 87.289±0.00 80.586±0.00 N/A 113.783±0.00 N/A 58.030±9.53 N/A N/A 121.562±0.00 60.620±35.02 33.145±0.00
ENSMUST00000153666 N/A 594.392±114.51 N/A N/A 65.172±18.41 100.205±35.72 N/A N/A 82.554±15.28 N/A N/A 268.351±51.95 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000276 IBA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0006200 IEA ATP catabolic process
GO:0015986 IBA ATP synthesis coupled proton transport
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0021762 IEA substantia nigra development
GO:0046933 IBA proton-transporting ATP synthase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011553 atp5f1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 protein_coding Danio_rerio
ENSG00000116459 ATP5F1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 protein_coding Homo_sapiens

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