C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118209 Atp5f1-001 ENSMUSG00000000563 10090 - 3:105942698-105960099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000118209
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000118209 62.762±6.25 68.926±13.06 63.417±0.46 55.888±20.78 63.477±10.39 215.632±58.51 164.298±33.70 145.007±26.31 37.686±4.72 284.944±9.48 106.281±26.07 42.556±0.97

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000276 IBA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0006200 IEA ATP catabolic process
GO:0015986 IBA ATP synthesis coupled proton transport
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0021762 IEA substantia nigra development
GO:0046933 IBA proton-transporting ATP synthase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369721 ATP5F1-004 processed_transcript Homo_sapiens 0 525
ENST00000369722 ATP5F1-001 protein_coding Homo_sapiens 0 824
ENST00000397288 ATP5F1P4-001 processed_pseudogene Homo_sapiens 0 551
ENST00000464154 ATP5F1-002 processed_transcript Homo_sapiens 0 436
ENST00000468818 ATP5F1-006 processed_transcript Homo_sapiens 0 416
ENST00000483994 ATP5F1-005 protein_coding Homo_sapiens 0 520
ENST00000567330 ATP5F1P7-001 processed_pseudogene Homo_sapiens 0 651
ENST00000567372 RP11-421N8.1-001 processed_pseudogene Homo_sapiens 0 390

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