C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000794 Kcnn3 10090 + 3:89520164-89672072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000811 Kcnn3-001 89520164-89667761 protein_coding
  ENSMUST00000124584 Kcnn3-002 89662518-89672072 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000811ENSMUST00000124584
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000811 N/A 0.757±0.13 N/A 0.977±0.30 2.600±0.73 0.100±0.04 0.140±0.05 0.021±0.01 0.967±0.34 0.107±0.03 2.538±0.32 0.096±0.05 0.493±0.15
ENSMUST00000124584 3.972±3.90 0.230±0.07 2.041±0.00 N/A 1.048±0.00 0.143±0.01 0.094±0.00 0.010±0.00 N/A 0.126±0.05 0.786±0.51 0.073±0.03 0.048±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005516 IBA calmodulin binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016286 IBA small conductance calcium-activated potassium channel activity
GO:0030175 IEA filopodium
GO:0031594 IEA neuromuscular junction
GO:0043005 IEA neuron projection
GO:0043025 IBA neuronal cell body
GO:0044297 IEA cell body
GO:0046982 IEA protein heterodimerization activity
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019753 kcnn3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein_coding Danio_rerio
ENSG00000143603 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein_coding Homo_sapiens

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