C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000811 Kcnn3-001 ENSMUSG00000000794 10090 + 3:89520164-89667761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000811
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000811 0.757±0.13 0.977±0.30 2.600±0.73 0.100±0.04 0.140±0.05 0.021±0.01 0.967±0.34 0.107±0.03 2.538±0.32 0.096±0.05 0.493±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IBA calmodulin binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016286 IBA small conductance calcium-activated potassium channel activity
GO:0030175 IEA filopodium
GO:0031594 IEA neuromuscular junction
GO:0043005 IEA neuron projection
GO:0043025 IBA neuronal cell body
GO:0044297 IEA cell body
GO:0046982 IEA protein heterodimerization activity
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088588 kcnn1b-201 protein_coding Danio_rerio 0 885
ENSDART00000132685 kcnn1b-001 protein_coding Danio_rerio 0 885
ENSDART00000142596 kcnn1b-003 protein_coding Danio_rerio 0 785
ENST00000222249 KCNN1-001 protein_coding Homo_sapiens 0 723
ENST00000271915 KCNN3-001 protein_coding Homo_sapiens 0 3568
ENST00000358505 KCNN3-003 protein_coding Homo_sapiens 0 1746
ENST00000361147 KCNN3-002 protein_coding Homo_sapiens 0 2109
ENST00000615435 KCNN1-201 protein_coding Homo_sapiens 0 723
ENST00000618040 KCNN3-201 protein_coding Homo_sapiens 0 2165

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