C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143603 KCNN3 9606 - 1:154697455-154870280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000271915 KCNN3-001 154697455-154870280 protein_coding
  ENST00000358505 KCNN3-003 154707952-154868319 protein_coding
  ENST00000361147 KCNN3-002 154707426-154859843 protein_coding
  ENST00000515643 KCNN3-004 154702729-154708226 processed_transcript
  ENST00000618040 KCNN3-201 154697474-154870278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000271915ENST00000358505ENST00000361147ENST00000618040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000271915 N/A N/A 0.223±0.00 1.871±0.64 0.271±0.00 0.665±0.06 0.350±0.01 0.587±0.00 0.705±0.69 N/A 1.777±0.82 0.330±0.34 0.012±0.00 0.073±0.01
ENST00000358505 N/A 1.517±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.771±0.00 0.101±0.02 0.808±0.00
ENST00000361147 N/A 1.365±0.00 N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.879±0.09 N/A 1.144±0.00 N/A N/A
ENST00000618040 0.062±0.00 0.355±0.00 N/A N/A 0.188±0.00 0.747±0.00 N/A N/A 0.013±0.00 0.373±0.12 N/A 0.144±0.03 0.012±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LU CIL_0000LU_0002 CGP 1:154582062-154870280

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005516 IBA:IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IBA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0015269 IEA calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016286 IBA:IEA small conductance calcium-activated potassium channel activity
GO:0030175 IEA filopodium
GO:0031594 IEA neuromuscular junction
GO:0043005 IEA neuron projection
GO:0043025 IBA neuronal cell body
GO:0044297 IEA cell body
GO:0046982 IEA protein heterodimerization activity
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019753 kcnn3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein_coding Danio_rerio
ENSMUSG00000000794 Kcnn3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein_coding Mus_musculus

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