C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 79
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001420 Tmem79 10090 - 3:88328655-88334504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001456 Tmem79-001 88328655-88334504 protein_coding
  ENSMUST00000107552 Tmem79-003 88329047-88334454 protein_coding
  ENSMUST00000107553 Tmem79-002 88329046-88334268 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonLungOvaryPlacentaTestisENSMUST00000001456ENSMUST00000107552ENSMUST00000107553
Transcript ID Adipose Adrenal Bladder Breast Colon Lung Ovary Placenta Testis
ENSMUST00000001456 6.509±0.00 N/A 9.825±0.45 N/A N/A N/A N/A 4.413±0.00 0.123±0.00
ENSMUST00000107552 11.025±1.20 N/A 10.742±0.00 N/A 12.294±0.00 N/A N/A N/A 2.517±1.66
ENSMUST00000107553 16.522±0.76 10.077±1.41 N/A 21.712±1.96 18.808±3.98 14.292±0.00 7.497±0.00 N/A 2.014±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002070 IMP epithelial cell maturation
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0016021 IEA integral component of membrane
GO:0031069 IMP hair follicle morphogenesis
GO:0032588 IDA trans-Golgi network membrane
GO:0042335 IMP cuticle development
GO:0045055 IMP regulated secretory pathway
GO:0045684 IMP positive regulation of epidermis development
GO:0061436 IMP establishment of skin barrier
GO:0070268 IMP cornification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071250 tmem79a transmembrane protein 79a protein_coding Danio_rerio
ENSDARG00000076861 tmem79b transmembrane protein 79b protein_coding Danio_rerio
ENSG00000163472 TMEM79 transmembrane protein 79 protein_coding Homo_sapiens

Loading