C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000898_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs2127 | VISTA | 9606 | 1:155789635-156392759  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000116580  (GON4L)gon-4-like (C. elegans) |
ENST00000271883 (GON4L-018)
|
155750332-155857295 | protein_coding | |
|
ENST00000361040 (GON4L-001)
|
155764427-155857204 | protein_coding | ||
|
ENST00000368331 (GON4L-201)
|
155749662-155857295 | protein_coding | ||
|
ENST00000437809 (GON4L-019)
|
155749717-155859400 | protein_coding | ||
|
ENST00000460075 (GON4L-022)
|
155754017-155757967 | retained_intron | ||
|
ENST00000466224 (GON4L-015)
|
155776395-155784389 | processed_transcript | ||
|
ENST00000467009 (GON4L-003)
|
155784375-155821520 | processed_transcript | ||
|
ENST00000468867 (GON4L-017)
|
155822447-155853405 | processed_transcript | ||
|
ENST00000471341 (GON4L-002)
|
155764784-155857217 | processed_transcript | ||
|
ENST00000473267 (GON4L-020)
|
155749942-155752202 | retained_intron | ||
|
ENST00000482386 (GON4L-014)
|
155774807-155805024 | processed_transcript | ||
|
ENST00000483032 (GON4L-021)
|
155756541-155757940 | retained_intron | ||
|
ENST00000488251 (GON4L-016)
|
155826870-155853809 | processed_transcript | ||
|
ENST00000490801 (GON4L-011)
|
155766536-155776461 | processed_transcript | ||
|
ENST00000496021 (GON4L-010)
|
155767086-155771201 | processed_transcript | ||
|
ENST00000497369 (GON4L-008)
|
155765449-155773420 | processed_transcript | ||
|
ENST00000615926 (GON4L-202)
|
155749662-155859400 | protein_coding | ||
|
ENST00000620426 (GON4L-203)
|
155750332-155857295 | protein_coding | ||
|
ENST00000622608 (GON4L-204)
|
155764844-155857295 | protein_coding | ||
|
ENSG00000116584 (ARHGEF2) Rho/Rac guanine nucleotide exchange factor (GEF) 2 |
ENST00000313667 (ARHGEF2-002)
|
155947942-155978427 | protein_coding | |
|
ENST00000313695 (ARHGEF2-003)
|
155946851-155978160 | protein_coding | ||
|
ENST00000361247 (ARHGEF2-001)
|
155946854-155978527 | protein_coding | ||
|
ENST00000368315 (ARHGEF2-201)
|
155947367-155952721 | protein_coding | ||
|
ENST00000423422 (ARHGEF2-017)
|
155985375-156007070 | protein_coding | ||
|
ENST00000462460 (ARHGEF2-004)
|
155946855-155990073 | protein_coding | ||
|
ENST00000465079 (ARHGEF2-011)
|
155968809-155979113 | retained_intron | ||
|
ENST00000470541 (ARHGEF2-007)
|
155946856-155951748 | protein_coding | ||
|
ENST00000470874 (ARHGEF2-009)
|
155963127-155966479 | nonsense_mediated_decay | ||
|
ENST00000470975 (ARHGEF2-016)
|
155952803-155961957 | retained_intron | ||
|
ENST00000471589 (ARHGEF2-010)
|
155963140-155979099 | protein_coding | ||
|
ENST00000474428 (ARHGEF2-015)
|
155952732-155962623 | processed_transcript | ||
|
ENST00000476273 (ARHGEF2-008)
|
155964988-155978501 | processed_transcript | ||
|
ENST00000477754 (ARHGEF2-014)
|
155946855-156002564 | processed_transcript | ||
|
ENST00000487755 (ARHGEF2-006)
|
155968220-155971063 | retained_intron | ||
|
ENST00000495070 (ARHGEF2-005)
|
155969248-155989499 | protein_coding | ||
|
ENST00000497907 (ARHGEF2-012)
|
155964988-155978169 | protein_coding | ||
|
ENST00000608543 (ARHGEF2-013)
|
155961939-155962972 | retained_intron | ||
|
ENST00000609126 (ARHGEF2-019)
|
155989234-155991212 | processed_transcript | ||
|
ENST00000609707 (ARHGEF2-018)
|
155965324-155969729 | protein_coding | ||
|
ENSG00000116586 (LAMTOR2) late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 |
ENST00000368302 (LAMTOR2-003)
|
156054850-156058503 | protein_coding | |
|
ENST00000368304 (LAMTOR2-002)
|
156054792-156058506 | protein_coding | ||
|
ENST00000368305 (LAMTOR2-001)
|
156054752-156058510 | protein_coding | ||
|
ENST00000463371 (LAMTOR2-006)
|
156055496-156058506 | processed_transcript | ||
|
ENST00000487106 (LAMTOR2-004)
|
156055085-156058506 | processed_transcript | ||
|
ENST00000489664 (LAMTOR2-005)
|
156054821-156055993 | processed_transcript | ||
|
ENSG00000132677 (RHBG) Rh family, B glycoprotein (gene/pseudogene) |
ENST00000451864 (RHBG-006)
|
156369212-156385148 | nonsense_mediated_decay | |
|
ENST00000467375 (RHBG-005)
|
156369212-156371879 | retained_intron | ||
|
ENST00000494874 (RHBG-008)
|
156382143-156384884 | processed_transcript | ||
|
ENST00000537040 (RHBG-001)
|
156369212-156385219 | protein_coding | ||
|
ENST00000612897 (RHBG-003)
|
156369212-156385219 | nonsense_mediated_decay | ||
|
ENST00000613460 (RHBG-002)
|
156369212-156385219 | nonsense_mediated_decay | ||
|
ENST00000618120 (RHBG-004)
|
156369240-156385213 | retained_intron | ||
|
ENST00000620376 (RHBG-009)
|
156369251-156385219 | nonsense_mediated_decay | ||
|
ENST00000622297 (RHBG-007)
|
156382313-156384603 | retained_intron | ||
|
ENSG00000132680 (KIAA0907) KIAA0907 |
ENST00000368319 (KIAA0907-002)
|
155921385-155934373 | protein_coding | |
|
ENST00000368320 (KIAA0907-003)
|
155913045-155934399 | protein_coding | ||
|
ENST00000368321 (KIAA0907-001)
|
155913043-155934397 | protein_coding | ||
|
ENST00000465953 (KIAA0907-006)
|
155915664-155916942 | processed_transcript | ||
|
ENST00000466520 (KIAA0907-005)
|
155915577-155917574 | processed_transcript | ||
|
ENST00000466713 (KIAA0907-009)
|
155926471-155934398 | processed_transcript | ||
|
ENST00000478002 (KIAA0907-004)
|
155914112-155925763 | processed_transcript | ||
|
ENST00000482337 (KIAA0907-008)
|
155921422-155934390 | processed_transcript | ||
|
ENST00000483237 (KIAA0907-007)
|
155921239-155922014 | processed_transcript | ||
|
ENST00000491599 (KIAA0907-010)
|
155932273-155934400 | processed_transcript | ||
|
ENSG00000132698 (RAB25) RAB25, member RAS oncogene family |
ENST00000361084 (RAB25-001)
|
156061160-156070514 | protein_coding | |
|
ENST00000463614 (RAB25-002)
|
156061189-156066282 | processed_transcript | ||
|
ENST00000473336 (RAB25-003)
|
156061383-156070504 | processed_transcript | ||
|
ENST00000487325 (RAB25-005)
|
156061206-156070106 | processed_transcript | ||
|
ENST00000497968 (RAB25-004)
|
156068212-156070365 | processed_transcript | ||
|
ENST00000615862 (RAB25-201)
|
156061191-156070457 | protein_coding | ||
|
ENSG00000132718 (SYT11) synaptotagmin XI |
ENST00000368324 (SYT11-001)
|
155859509-155885199 | protein_coding | |
|
ENSG00000143622 (RIT1) Ras-like without CAAX 1 |
ENST00000368322 (RIT1-002)
|
155900274-155910915 | protein_coding | |
|
ENST00000368323 (RIT1-001)
|
155897808-155911404 | protein_coding | ||
|
ENST00000461050 (RIT1-003)
|
155900398-155911344 | nonsense_mediated_decay | ||
|
ENST00000462687 (RIT1-004)
|
155910095-155910791 | retained_intron | ||
|
ENST00000539040 (RIT1-005)
|
155900183-155911402 | protein_coding | ||
|
ENST00000609492 (RIT1-006)
|
155900594-155910881 | protein_coding | ||
|
ENSG00000160781 (PAQR6) progestin and adipoQ receptor family member VI |
ENST00000292291 (PAQR6-001)
|
156243415-156248090 | protein_coding | |
|
ENST00000335852 (PAQR6-006)
|
156243416-156248052 | protein_coding | ||
|
ENST00000340183 (PAQR6-003)
|
156243422-156248056 | protein_coding | ||
|
ENST00000356983 (PAQR6-201)
|
156243321-156248117 | protein_coding | ||
|
ENST00000368270 (PAQR6-002)
|
156243423-156248031 | protein_coding | ||
|
ENST00000468632 (PAQR6-007)
|
156243423-156248036 | processed_transcript | ||
|
ENST00000470198 (PAQR6-010)
|
156245154-156248054 | processed_transcript | ||
|
ENST00000475507 (PAQR6-009)
|
156245217-156248056 | processed_transcript | ||
|
ENST00000480773 (PAQR6-008)
|
156244774-156248014 | processed_transcript | ||
|
ENST00000491107 (PAQR6-005)
|
156243422-156248056 | processed_transcript | ||
|
ENST00000492619 (PAQR6-011)
|
156243415-156248076 | processed_transcript | ||
|
ENST00000540423 (PAQR6-202)
|
156243321-156248117 | protein_coding | ||
|
ENST00000612424 (PAQR6-203)
|
156243321-156248117 | protein_coding | ||
|
ENST00000613336 (PAQR6-204)
|
156243321-156248117 | protein_coding | ||
|
ENST00000623241 (PAQR6-205)
|
156243321-156248117 | protein_coding | ||
|
ENSG00000160785 (SLC25A44) solute carrier family 25, member 44 |
ENST00000359511 (SLC25A44-001)
|
156194089-156212796 | protein_coding | |
|
ENST00000423538 (SLC25A44-201)
|
156193932-156212795 | protein_coding | ||
|
ENST00000468973 (SLC25A44-004)
|
156200390-156210427 | processed_transcript | ||
|
ENST00000469537 (SLC25A44-002)
|
156196205-156212795 | processed_transcript | ||
|
ENST00000482737 (SLC25A44-003)
|
156199618-156200186 | processed_transcript | ||
|
ENSG00000160789 (LMNA) lamin A/C |
ENST00000347559 (LMNA-201)
|
156114670-156140089 | protein_coding | |
|
ENST00000361308 (LMNA-202)
|
156114670-156137764 | protein_coding | ||
|
ENST00000368297 (LMNA-007)
|
156126189-156137865 | protein_coding | ||
|
ENST00000368298 (LMNA-018)
|
156135113-156137267 | retained_intron | ||
|
ENST00000368299 (LMNA-004)
|
156114722-156139317 | protein_coding | ||
|
ENST00000368300 (LMNA-001)
|
156114707-156140089 | protein_coding | ||
|
ENST00000368301 (LMNA-002)
|
156082578-156137865 | protein_coding | ||
|
ENST00000448611 (LMNA-017)
|
156126160-156140013 | protein_coding | ||
|
ENST00000459904 (LMNA-015)
|
156136293-156137292 | processed_transcript | ||
|
ENST00000469565 (LMNA-025)
|
156114713-156134446 | processed_transcript | ||
|
ENST00000470199 (LMNA-023)
|
156114711-156134498 | processed_transcript | ||
|
ENST00000470835 (LMNA-013)
|
156082631-156093811 | processed_transcript | ||
|
ENST00000473598 (LMNA-006)
|
156126555-156139303 | protein_coding | ||
|
ENST00000478063 (LMNA-024)
|
156114711-156115047 | processed_transcript | ||
|
ENST00000495341 (LMNA-010)
|
156082600-156083613 | processed_transcript | ||
|
ENST00000496738 (LMNA-005)
|
156134821-156139303 | processed_transcript | ||
|
ENST00000498722 (LMNA-019)
|
156135733-156138161 | retained_intron | ||
|
ENST00000502357 (LMNA-026)
|
156123142-156134528 | processed_transcript | ||
|
ENST00000502751 (LMNA-021)
|
156082573-156134487 | processed_transcript | ||
|
ENST00000504687 (LMNA-028)
|
156126545-156134960 | protein_coding | ||
|
ENST00000506981 (LMNA-030)
|
156137462-156139103 | retained_intron | ||
|
ENST00000508500 (LMNA-020)
|
156136087-156139171 | protein_coding | ||
|
ENST00000515459 (LMNA-027)
|
156126174-156135225 | nonsense_mediated_decay | ||
|
ENST00000515711 (LMNA-022)
|
156106658-156114838 | processed_transcript | ||
|
ENST00000515824 (LMNA-029)
|
156134805-156135408 | retained_intron | ||
|
ENSG00000160803 (UBQLN4) ubiquilin 4 |
ENST00000368309 (UBQLN4-001)
|
156035301-156053794 | protein_coding | |
|
ENST00000459954 (UBQLN4-003)
|
156041872-156042538 | retained_intron | ||
|
ENST00000472638 (UBQLN4-004)
|
156048502-156053650 | processed_transcript | ||
|
ENSG00000163467 (TSACC) TSSK6 activating co-chaperone |
ENST00000368251 (TSACC-008)
|
156338902-156346995 | protein_coding | |
|
ENST00000368252 (TSACC-003)
|
156338694-156346995 | protein_coding | ||
|
ENST00000368253 (TSACC-002)
|
156338503-156346990 | protein_coding | ||
|
ENST00000368254 (TSACC-005)
|
156338523-156346995 | protein_coding | ||
|
ENST00000368255 (TSACC-001)
|
156337314-156346995 | protein_coding | ||
|
ENST00000466306 (TSACC-007)
|
156338788-156346992 | protein_coding | ||
|
ENST00000470342 (TSACC-004)
|
156338507-156346993 | protein_coding | ||
|
ENST00000481479 (TSACC-006)
|
156338628-156346995 | protein_coding | ||
|
ENSG00000163468 (CCT3) chaperonin containing TCP1, subunit 3 (gamma) |
ENST00000295688 (CCT3-001)
|
156308968-156338465 | protein_coding | |
|
ENST00000368256 (CCT3-008)
|
156332653-156338311 | processed_transcript | ||
|
ENST00000368258 (CCT3-015)
|
156308969-156338263 | nonsense_mediated_decay | ||
|
ENST00000368259 (CCT3-017)
|
156308969-156338245 | protein_coding | ||
|
ENST00000368261 (CCT3-010)
|
156308992-156325089 | processed_transcript | ||
|
ENST00000368262 (CCT3-016)
|
156309014-156338247 | nonsense_mediated_decay | ||
|
ENST00000413555 (CCT3-014)
|
156318870-156367859 | protein_coding | ||
|
ENST00000415548 (CCT3-011)
|
156324980-156338214 | protein_coding | ||
|
ENST00000446905 (CCT3-013)
|
156320840-156367873 | protein_coding | ||
|
ENST00000463132 (CCT3-012)
|
156320839-156367837 | processed_transcript | ||
|
ENST00000472765 (CCT3-004)
|
156309165-156338257 | protein_coding | ||
|
ENST00000478640 (CCT3-019)
|
156320923-156338305 | protein_coding | ||
|
ENST00000489870 (CCT3-007)
|
156335115-156338206 | retained_intron | ||
|
ENST00000490221 (CCT3-006)
|
156320840-156336007 | retained_intron | ||
|
ENST00000496684 (CCT3-021)
|
156318921-156338229 | protein_coding | ||
|
ENST00000533194 (CCT3-020)
|
156318957-156338292 | protein_coding | ||
|
ENSG00000163472 (TMEM79) transmembrane protein 79 |
ENST00000295694 (TMEM79-001)
|
156282948-156292443 | protein_coding | |
|
ENST00000357501 (TMEM79-004)
|
156282953-156291948 | protein_coding | ||
|
ENST00000405535 (TMEM79-201)
|
156284279-156292443 | protein_coding | ||
|
ENST00000456810 (TMEM79-005)
|
156284322-156291525 | protein_coding | ||
|
ENST00000463670 (TMEM79-002)
|
156282935-156292443 | processed_transcript | ||
|
ENST00000485135 (TMEM79-006)
|
156286276-156293185 | processed_transcript | ||
|
ENST00000495881 (TMEM79-003)
|
156284314-156292443 | processed_transcript | ||
|
ENSG00000163479 (SSR2) signal sequence receptor, beta (translocon-associated protein beta) |
ENST00000295702 (SSR2-001)
|
156009048-156020959 | protein_coding | |
|
ENST00000368311 (SSR2-002)
|
156010221-156020950 | retained_intron | ||
|
ENST00000466905 (SSR2-009)
|
156011810-156020931 | nonsense_mediated_decay | ||
|
ENST00000467041 (SSR2-013)
|
156020013-156020845 | retained_intron | ||
|
ENST00000472467 (SSR2-003)
|
156009049-156013040 | retained_intron | ||
|
ENST00000472898 (SSR2-010)
|
156011581-156020928 | retained_intron | ||
|
ENST00000473699 (SSR2-005)
|
156009335-156020946 | nonsense_mediated_decay | ||
|
ENST00000474377 (SSR2-011)
|
156011810-156020914 | nonsense_mediated_decay | ||
|
ENST00000480176 (SSR2-004)
|
156009129-156020935 | retained_intron | ||
|
ENST00000480567 (SSR2-008)
|
156009360-156020889 | protein_coding | ||
|
ENST00000484320 (SSR2-006)
|
156009107-156020912 | retained_intron | ||
|
ENST00000488179 (SSR2-012)
|
156009062-156020171 | retained_intron | ||
|
ENST00000496742 (SSR2-007)
|
156009105-156020933 | protein_coding | ||
|
ENST00000526212 (SSR2-018)
|
156018270-156020903 | protein_coding | ||
|
ENST00000529008 (SSR2-014)
|
156009086-156020917 | protein_coding | ||
|
ENST00000531790 (SSR2-016)
|
156009550-156020912 | nonsense_mediated_decay | ||
|
ENST00000531917 (SSR2-017)
|
156011810-156020789 | protein_coding | ||
|
ENST00000532074 (SSR2-015)
|
156009115-156020914 | retained_intron | ||
|
ENSG00000173080 (RXFP4) relaxin/insulin-like family peptide receptor 4 |
ENST00000368318 (RXFP4-001)
|
155941710-155942949 | protein_coding | |
|
ENSG00000189030 (VHLL) von Hippel-Lindau tumor suppressor-like |
ENST00000339922 (VHLL-001)
|
156298624-156299299 | protein_coding | |
|
ENSG00000196189 (SEMA4A) sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A |
ENST00000355014 (SEMA4A-002)
|
156150019-156177744 | protein_coding | |
|
ENST00000368282 (SEMA4A-003)
|
156154371-156177752 | protein_coding | ||
|
ENST00000368284 (SEMA4A-004)
|
156153578-156177743 | protein_coding | ||
|
ENST00000368285 (SEMA4A-001)
|
156153527-156177744 | protein_coding | ||
|
ENST00000368286 (SEMA4A-201)
|
156153585-156177743 | protein_coding | ||
|
ENST00000414683 (SEMA4A-007)
|
156149723-156161493 | protein_coding | ||
|
ENST00000435124 (SEMA4A-015)
|
156147366-156161498 | protein_coding | ||
|
ENST00000438830 (SEMA4A-013)
|
156153607-156161028 | protein_coding | ||
|
ENST00000462892 (SEMA4A-011)
|
156161227-156175647 | retained_intron | ||
|
ENST00000466698 (SEMA4A-009)
|
156160544-156161669 | retained_intron | ||
|
ENST00000469065 (SEMA4A-010)
|
156160950-156163298 | retained_intron | ||
|
ENST00000470306 (SEMA4A-005)
|
156154877-156159031 | retained_intron | ||
|
ENST00000484155 (SEMA4A-012)
|
156175333-156176656 | processed_transcript | ||
|
ENST00000485575 (SEMA4A-008)
|
156150203-156156574 | processed_transcript | ||
|
ENST00000487358 (SEMA4A-006)
|
156156425-156175232 | processed_transcript | ||
|
ENSG00000198715 (C1orf85) chromosome 1 open reading frame 85 |
ENST00000362007 (C1orf85-001)
|
156292688-156295672 | protein_coding | |
|
ENST00000368264 (C1orf85-006)
|
156293423-156295654 | nonsense_mediated_decay | ||
|
ENST00000461597 (C1orf85-009)
|
156290089-156293381 | nonsense_mediated_decay | ||
|
ENST00000472870 (C1orf85-007)
|
156290541-156295654 | nonsense_mediated_decay | ||
|
ENST00000476177 (C1orf85-002)
|
156293373-156295653 | nonsense_mediated_decay | ||
|
ENST00000479084 (C1orf85-003)
|
156293518-156294992 | retained_intron | ||
|
ENST00000480968 (C1orf85-010)
|
156290687-156291506 | processed_transcript | ||
|
ENST00000481050 (C1orf85-012)
|
156292695-156294076 | protein_coding | ||
|
ENST00000482579 (C1orf85-011)
|
156292688-156293667 | processed_transcript | ||
|
ENST00000484214 (C1orf85-005)
|
156293617-156295647 | retained_intron | ||
|
ENST00000497831 (C1orf85-008)
|
156290096-156291550 | processed_transcript | ||
|
ENST00000497955 (C1orf85-004)
|
156293384-156294513 | retained_intron | ||
|
ENST00000612353 (C1orf85-201)
|
156292687-156295689 | protein_coding | ||
|
ENST00000614643 (C1orf85-202)
|
156292687-156295689 | protein_coding | ||
|
ENST00000622703 (C1orf85-203)
|
156292687-156295689 | protein_coding | ||
|
ENSG00000198952 (SMG5) SMG5 nonsense mediated mRNA decay factor |
ENST00000361813 (SMG5-001)
|
156249224-156282825 | protein_coding | |
|
ENST00000468993 (SMG5-003)
|
156253048-156253762 | retained_intron | ||
|
ENST00000473643 (SMG5-004)
|
156251079-156252555 | retained_intron | ||
|
ENST00000476954 (SMG5-005)
|
156250033-156251380 | retained_intron | ||
|
ENST00000489907 (SMG5-008)
|
156266137-156267588 | processed_transcript | ||
|
ENSG00000201614 (RNU4-19P) RNA, U4 small nuclear 19, pseudogene |
ENST00000364744 (RNU4-19P-201)
|
155894281-155894386 | snRNA | |
|
ENSG00000207475 (SNORA80E) small nucleolar RNA, H/ACA box 80E |
ENST00000384744 (SNORA80E-201)
|
155919909-155920045 | snoRNA | |
|
ENSG00000224276 (RP11-336K24.5) |
ENST00000415726 (RP11-336K24.5-001)
|
155991390-156001787 | antisense | |
|
ENSG00000234937 (RP11-101O6.2) |
ENST00000413921 (RP11-101O6.2-001)
|
155845367-155846624 | processed_pseudogene | |
|
ENSG00000237390 (RP11-139I14.2) |
ENST00000451362 (RP11-139I14.2-001)
|
156388226-156395609 | lincRNA | |
|
ENSG00000252808 (SCARNA4) small Cajal body-specific RNA 4 |
ENST00000516999 (SCARNA4-201)
|
155925958-155926086 | snoRNA | |
|
ENSG00000260238 (PMF1-BGLAP) PMF1-BGLAP readthrough |
ENST00000320139 (PMF1-BGLAP-002)
|
156213009-156243321 | protein_coding | |
|
ENST00000368276 (PMF1-BGLAP-001)
|
156213007-156243263 | protein_coding | ||
|
ENST00000490491 (PMF1-BGLAP-003)
|
156212982-156243332 | protein_coding | ||
|
ENST00000567140 (PMF1-BGLAP-201)
|
156212988-156243332 | protein_coding | ||
|
ENSG00000273002 (RP11-336K24.12) |
ENST00000610146 (RP11-336K24.12-001)
|
155978799-155982986 | antisense | |
|
ENSG00000277817 (MIR6738) microRNA 6738 |
ENST00000619620 (MIR6738-201)
|
155951273-155951336 | miRNA | |
| CIL_000898_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs2127 | VISTA | 10090 | 3:88224783-88827970 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000001415 (Smg5) Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) |
ENSMUST00000001451 (Smg5-201)
|
88336260-88362337 | protein_coding | |
|
ENSMUSG00000001416 (Cct3) chaperonin containing Tcp1, subunit 3 (gamma) |
ENSMUST00000001452 (Cct3-001)
|
88297116-88321767 | protein_coding | |
|
ENSMUST00000163735 (Cct3-007)
|
88302838-88320650 | protein_coding | ||
|
ENSMUST00000164122 (Cct3-009)
|
88320995-88321764 | retained_intron | ||
|
ENSMUST00000164166 (Cct3-006)
|
88297174-88321766 | protein_coding | ||
|
ENSMUST00000164783 (Cct3-003)
|
88297126-88314407 | retained_intron | ||
|
ENSMUST00000167000 (Cct3-002)
|
88297123-88321507 | retained_intron | ||
|
ENSMUST00000167718 (Cct3-004)
|
88297153-88321507 | retained_intron | ||
|
ENSMUST00000168062 (Cct3-005)
|
88297188-88321507 | protein_coding | ||
|
ENSMUST00000168971 (Cct3-008)
|
88321048-88321765 | protein_coding | ||
|
ENSMUSG00000001417 (Rhbg) |
ENSMUST00000163277 (Rhbg-003)
|
88245195-88287210 | processed_transcript | |
|
ENSMUST00000165196 (Rhbg-002)
|
88243380-88287210 | protein_coding | ||
|
ENSMUST00000171887 (Rhbg-001)
|
88242874-88254709 | protein_coding | ||
|
ENSMUSG00000001418 (0610031J06Rik) glycosylated lysosomal membrane protein |
ENSMUST00000001454 (0610031J06Rik-009)
|
88325082-88328368 | protein_coding | |
|
ENSMUST00000131666 (0610031J06Rik-004)
|
88325072-88326467 | nonsense_mediated_decay | ||
|
ENSMUST00000140039 (0610031J06Rik-005)
|
88326044-88328318 | retained_intron | ||
|
ENSMUST00000152801 (0610031J06Rik-002)
|
88325060-88327587 | retained_intron | ||
|
ENSMUST00000153716 (0610031J06Rik-003)
|
88325058-88326578 | retained_intron | ||
|
ENSMUST00000154381 (0610031J06Rik-006)
|
88328073-88328581 | protein_coding | ||
|
ENSMUST00000176425 (0610031J06Rik-007)
|
88325082-88328368 | protein_coding | ||
|
ENSMUST00000176519 (0610031J06Rik-008)
|
88325082-88328363 | protein_coding | ||
|
ENSMUST00000177005 (0610031J06Rik-001)
|
88325023-88331313 | protein_coding | ||
|
ENSMUSG00000001420 (Tmem79) transmembrane protein 79 |
ENSMUST00000001456 (Tmem79-001)
|
88328655-88334504 | protein_coding | |
|
ENSMUST00000107552 (Tmem79-003)
|
88329047-88334454 | protein_coding | ||
|
ENSMUST00000107553 (Tmem79-002)
|
88329046-88334268 | protein_coding | ||
|
ENSMUSG00000008601 (Rab25) RAB25, member RAS oncogene family |
ENSMUST00000008745 (Rab25-001)
|
88542029-88548300 | protein_coding | |
|
ENSMUST00000131775 (Rab25-002)
|
88542309-88548249 | protein_coding | ||
|
ENSMUST00000141371 (Rab25-004)
|
88542676-88543514 | retained_intron | ||
|
ENSMUST00000149724 (Rab25-003)
|
88544642-88548282 | retained_intron | ||
|
ENSMUSG00000008604 (Ubqln4) ubiquilin 4 |
ENSMUST00000008748 (Ubqln4-201)
|
88553716-88569725 | protein_coding | |
|
ENSMUSG00000010538 (Tsacc) TSSK6 activating co-chaperone |
ENSMUST00000010682 (Tsacc-002)
|
88282760-88296838 | protein_coding | |
|
ENSMUST00000107556 (Tsacc-001)
|
88282757-88296999 | protein_coding | ||
|
ENSMUST00000123536 (Tsacc-003)
|
88294924-88296896 | retained_intron | ||
|
ENSMUSG00000028057 (Rit1) Ras-like without CAAX 1 |
ENSMUST00000029692 (Rit1-001)
|
88716838-88729727 | protein_coding | |
|
ENSMUST00000165846 (Rit1-005)
|
88716881-88718007 | retained_intron | ||
|
ENSMUST00000166234 (Rit1-003)
|
88716898-88731049 | retained_intron | ||
|
ENSMUST00000170377 (Rit1-002)
|
88716894-88731041 | nonsense_mediated_decay | ||
|
ENSMUST00000171645 (Rit1-004)
|
88716876-88726369 | protein_coding | ||
|
ENSMUST00000172187 (Rit1-008)
|
88716911-88726319 | retained_intron | ||
|
ENSMUST00000172252 (Rit1-007)
|
88716906-88729556 | protein_coding | ||
|
ENSMUST00000172333 (Rit1-006)
|
88716899-88729548 | nonsense_mediated_decay | ||
|
ENSMUSG00000028059 (Arhgef2) rho/rac guanine nucleotide exchange factor (GEF) 2 |
ENSMUST00000029694 (Arhgef2-001)
|
88621106-88648052 | protein_coding | |
|
ENSMUST00000107510 (Arhgef2-005)
|
88621292-88648050 | protein_coding | ||
|
ENSMUST00000170653 (Arhgef2-006)
|
88621436-88648048 | protein_coding | ||
|
ENSMUST00000175745 (Arhgef2-022)
|
88629571-88632334 | protein_coding | ||
|
ENSMUST00000175749 (Arhgef2-011)
|
88607659-88617339 | processed_transcript | ||
|
ENSMUST00000175779 (Arhgef2-004)
|
88616517-88646895 | protein_coding | ||
|
ENSMUST00000175903 (Arhgef2-031)
|
88607791-88646929 | protein_coding | ||
|
ENSMUST00000175911 (Arhgef2-009)
|
88622921-88640708 | protein_coding | ||
|
ENSMUST00000176079 (Arhgef2-023)
|
88632196-88633590 | retained_intron | ||
|
ENSMUST00000176123 (Arhgef2-025)
|
88632733-88633638 | retained_intron | ||
|
ENSMUST00000176226 (Arhgef2-012)
|
88607454-88614577 | processed_transcript | ||
|
ENSMUST00000176243 (Arhgef2-017)
|
88623354-88633617 | protein_coding | ||
|
ENSMUST00000176272 (Arhgef2-029)
|
88643932-88646965 | processed_transcript | ||
|
ENSMUST00000176301 (Arhgef2-026)
|
88634323-88635076 | retained_intron | ||
|
ENSMUST00000176307 (Arhgef2-016)
|
88622459-88632926 | protein_coding | ||
|
ENSMUST00000176316 (Arhgef2-019)
|
88629442-88632976 | protein_coding | ||
|
ENSMUST00000176400 (Arhgef2-020)
|
88621548-88633060 | retained_intron | ||
|
ENSMUST00000176401 (Arhgef2-024)
|
88621460-88634462 | retained_intron | ||
|
ENSMUST00000176500 (Arhgef2-003)
|
88616143-88648052 | protein_coding | ||
|
ENSMUST00000176514 (Arhgef2-015)
|
88614421-88617501 | processed_transcript | ||
|
ENSMUST00000176528 (Arhgef2-027)
|
88631911-88634662 | processed_transcript | ||
|
ENSMUST00000176539 (Arhgef2-013)
|
88615367-88634499 | protein_coding | ||
|
ENSMUST00000176804 (Arhgef2-008)
|
88621125-88646863 | protein_coding | ||
|
ENSMUST00000176879 (Arhgef2-018)
|
88629473-88632992 | protein_coding | ||
|
ENSMUST00000177023 (Arhgef2-014)
|
88614609-88633595 | protein_coding | ||
|
ENSMUST00000177091 (Arhgef2-010)
|
88632918-88637816 | retained_intron | ||
|
ENSMUST00000177099 (Arhgef2-028)
|
88642426-88643912 | retained_intron | ||
|
ENSMUST00000177120 (Arhgef2-021)
|
88629469-88632101 | retained_intron | ||
|
ENSMUST00000177303 (Arhgef2-030)
|
88621555-88646929 | protein_coding | ||
|
ENSMUST00000177418 (Arhgef2-007)
|
88621138-88639536 | retained_intron | ||
|
ENSMUST00000177498 (Arhgef2-002)
|
88616143-88647532 | protein_coding | ||
|
ENSMUSG00000028060 (2810403A07Rik) RIKEN cDNA 2810403A07 gene |
ENSMUST00000029696 (2810403A07Rik-201)
|
88685794-88712933 | protein_coding | |
|
ENSMUSG00000028062 (Lamtor2) late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 |
ENSMUST00000029698 (Lamtor2-001)
|
88549819-88553024 | protein_coding | |
|
ENSMUST00000119002 (Lamtor2-003)
|
88549820-88552859 | protein_coding | ||
|
ENSMUST00000145172 (Lamtor2-002)
|
88552230-88553074 | retained_intron | ||
|
ENSMUST00000145548 (Lamtor2-005)
|
88549819-88551094 | retained_intron | ||
|
ENSMUST00000156421 (Lamtor2-004)
|
88549821-88552893 | processed_transcript | ||
|
ENSMUSG00000028063 (Lmna) lamin A |
ENSMUST00000029699 (Lmna-001)
|
88481148-88503335 | protein_coding | |
|
ENSMUST00000036252 (Lmna-003)
|
88483206-88493312 | protein_coding | ||
|
ENSMUST00000120377 (Lmna-002)
|
88483205-88503307 | protein_coding | ||
|
ENSMUST00000135494 (Lmna-005)
|
88481846-88503337 | processed_transcript | ||
|
ENSMUST00000147537 (Lmna-006)
|
88483206-88484607 | retained_intron | ||
|
ENSMUST00000149068 (Lmna-004)
|
88502753-88509956 | protein_coding | ||
|
ENSMUST00000150496 (Lmna-007)
|
88482077-88482864 | retained_intron | ||
|
ENSMUSG00000028064 (Sema4a) sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A |
ENSMUST00000029700 (Sema4a-001)
|
88435959-88455739 | protein_coding | |
|
ENSMUST00000107531 (Sema4a-002)
|
88435962-88455697 | protein_coding | ||
|
ENSMUST00000123753 (Sema4a-010)
|
88454765-88456436 | protein_coding | ||
|
ENSMUST00000125526 (Sema4a-011)
|
88452044-88455305 | protein_coding | ||
|
ENSMUST00000127436 (Sema4a-004)
|
88450097-88459101 | protein_coding | ||
|
ENSMUST00000135539 (Sema4a-015)
|
88435962-88448630 | retained_intron | ||
|
ENSMUST00000135732 (Sema4a-006)
|
88449824-88451786 | retained_intron | ||
|
ENSMUST00000141471 (Sema4a-003)
|
88453089-88456415 | protein_coding | ||
|
ENSMUST00000146921 (Sema4a-012)
|
88455725-88456436 | processed_transcript | ||
|
ENSMUST00000147200 (Sema4a-005)
|
88450585-88458876 | protein_coding | ||
|
ENSMUST00000149145 (Sema4a-014)
|
88435962-88450038 | retained_intron | ||
|
ENSMUST00000156108 (Sema4a-016)
|
88435962-88441139 | retained_intron | ||
|
ENSMUST00000165898 (Sema4a-201)
|
88435962-88459101 | protein_coding | ||
|
ENSMUST00000166237 (Sema4a-202)
|
88435962-88461182 | protein_coding | ||
|
ENSMUST00000169222 (Sema4a-203)
|
88435962-88458884 | protein_coding | ||
|
ENSMUST00000184487 (Sema4a-008)
|
88450035-88455314 | nonsense_mediated_decay | ||
|
ENSMUST00000184876 (Sema4a-009)
|
88450568-88459030 | nonsense_mediated_decay | ||
|
ENSMUST00000184972 (Sema4a-013)
|
88452831-88454842 | retained_intron | ||
|
ENSMUST00000185137 (Sema4a-007)
|
88449686-88451450 | nonsense_mediated_decay | ||
|
ENSMUSG00000028066 (Pmf1) polyamine-modulated factor 1 |
ENSMUST00000056370 (Pmf1-201)
|
88394143-88410316 | protein_coding | |
|
ENSMUSG00000041355 (Ssr2) signal sequence receptor, beta |
ENSMUST00000035785 (Ssr2-201)
|
88579671-88588397 | protein_coding | |
|
ENSMUSG00000041423 (Paqr6) progestin and adipoQ receptor family member VI |
ENSMUST00000123200 (Paqr6-004)
|
88364593-88365802 | retained_intron | |
|
ENSMUST00000147818 (Paqr6-005)
|
88366722-88368541 | retained_intron | ||
|
ENSMUST00000147948 (Paqr6-002)
|
88364584-88368033 | protein_coding | ||
|
ENSMUST00000147991 (Paqr6-001)
|
88364589-88368541 | protein_coding | ||
|
ENSMUST00000149640 (Paqr6-003)
|
88364591-88367243 | processed_transcript | ||
|
ENSMUSG00000049741 (Rxfp4) relaxin family peptide receptor 4 |
ENSMUST00000063119 (Rxfp4-001)
|
88651898-88653142 | protein_coding | |
|
ENSMUSG00000050144 (Slc25a44) solute carrier family 25, member 44 |
ENSMUST00000057935 (Slc25a44-201)
|
88410498-88425139 | protein_coding | |
|
ENSMUST00000168755 (Slc25a44-202)
|
88410498-88425139 | protein_coding | ||
|
ENSMUSG00000068923 (Syt11) synaptotagmin XI |
ENSMUST00000090945 (Syt11-201)
|
88744701-88772599 | protein_coding | |
|
ENSMUST00000107503 (Syt11-003)
|
88744700-88752051 | protein_coding | ||
|
ENSMUST00000107505 (Syt11-001)
|
88744700-88775164 | protein_coding | ||
|
ENSMUST00000130869 (Syt11-002)
|
88772714-88775152 | processed_transcript | ||
|
ENSMUST00000183267 (Syt11-004)
|
88747472-88762384 | protein_coding | ||
|
ENSMUSG00000074479 (Gm10704) predicted pseudogene 10704 |
ENSMUST00000098952 (Gm10704-201)
|
88576245-88577208 | protein_coding | |
|
ENSMUSG00000074480 (Mex3a) mex3 homolog A (C. elegans) |
ENSMUST00000172699 (Mex3a-001)
|
88532395-88541396 | protein_coding | |
|
ENSMUSG00000074483 (Bglap) bone gamma carboxyglutamate protein |
ENSMUST00000076048 (Bglap-001)
|
88383501-88384433 | protein_coding | |
|
ENSMUST00000128732 (Bglap-002)
|
88383827-88384464 | retained_intron | ||
|
ENSMUSG00000074486 (Bglap2) bone gamma-carboxyglutamate protein 2 |
ENSMUST00000098956 (Bglap2-001)
|
88377736-88378699 | protein_coding | |
|
ENSMUSG00000074489 (Bglap3) bone gamma-carboxyglutamate protein 3 |
ENSMUST00000075523 (Bglap3-002)
|
88368622-88369831 | protein_coding | |
|
ENSMUST00000107542 (Bglap3-001)
|
88368622-88372743 | protein_coding | ||
|
ENSMUST00000107543 (Bglap3-005)
|
88368616-88372743 | protein_coding | ||
|
ENSMUST00000140259 (Bglap3-004)
|
88368620-88369722 | retained_intron | ||
|
ENSMUST00000152477 (Bglap3-003)
|
88368620-88369581 | retained_intron | ||
|
ENSMUSG00000078684 (5830417I10Rik) RIKEN cDNA 5830417I10 gene |
ENSMUST00000135913 (5830417I10Rik-001)
|
88775216-88825587 | unprocessed_pseudogene | |
|
ENSMUSG00000078691 (Gm6821) predicted gene 6821 |
ENSMUST00000107540 (Gm6821-201)
|
88381004-88382811 | protein_coding | |
|
ENSMUSG00000084433 (Gm25945) predicted gene, 25945 |
ENSMUST00000122484 (Gm25945-201)
|
88707158-88707292 | snoRNA | |
|
ENSMUSG00000088604 (Gm25820) predicted gene, 25820 |
ENSMUST00000157979 (Gm25820-201)
|
88693930-88694057 | snoRNA | |
|
ENSMUSG00000091881 (Gm17146) predicted gene 17146 |
ENSMUST00000108464 (Gm17146-001)
|
88722090-88722670 | antisense | |
|
ENSMUSG00000096792 (Gm21956) predicted gene, 21956 |
ENSMUST00000179946 (Gm21956-201)
|
88376023-88377078 | protein_coding | |
|
ENSMUSG00000097156 (Gm3764) predicted gene 3764 |
ENSMUST00000180478 (Gm3764-008)
|
88228568-88229770 | lincRNA | |
|
ENSMUST00000180582 (Gm3764-002)
|
88207312-88225995 | lincRNA | ||
|
ENSMUST00000180635 (Gm3764-005)
|
88224280-88229959 | lincRNA | ||
|
ENSMUST00000180984 (Gm3764-007)
|
88225933-88228010 | lincRNA | ||
|
ENSMUST00000181134 (Gm3764-010)
|
88206813-88211295 | lincRNA | ||
|
ENSMUST00000181356 (Gm3764-011)
|
88214485-88221860 | lincRNA | ||
|
ENSMUST00000181361 (Gm3764-009)
|
88228783-88229959 | lincRNA | ||
|
ENSMUST00000181396 (Gm3764-004)
|
88214495-88226046 | lincRNA | ||
|
ENSMUST00000181550 (Gm3764-001)
|
88206826-88225438 | lincRNA | ||
|
ENSMUST00000181622 (Gm3764-006)
|
88222664-88224302 | lincRNA | ||
|
ENSMUST00000181636 (Gm3764-003)
|
88209472-88224288 | lincRNA | ||
Expression Patterns
|
