C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: karyopherin (importin) beta 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001440 Kpnb1 10090 - 11:97159714-97187881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001479 Kpnb1-001 97159714-97187881 protein_coding
  ENSMUST00000132633 Kpnb1-003 97162510-97164222 retained_intron
  ENSMUST00000153727 Kpnb1-002 97164221-97165400 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001479ENSMUST00000132633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001479 30.980±6.37 7.683±1.95 26.488±4.43 30.249±6.80 17.254±3.78 13.663±2.35 12.834±1.28 12.856±1.06 26.669±21.01 16.543±2.53 12.966±0.70 30.297±5.96 51.633±22.85 20.953±1.89
ENSMUST00000132633 N/A N/A N/A 82.469±0.00 N/A N/A N/A N/A N/A N/A N/A 172.769±0.00 319.368±200.96 174.740±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005635 IEA nuclear envelope
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0006610 IDA ribosomal protein import into nucleus
GO:0008536 IEA Ran GTPase binding
GO:0008565 IDA protein transporter activity
GO:0016020 IEA membrane
GO:0019899 IEA enzyme binding
GO:0019904 IEA protein domain specific binding
GO:0031965 IEA nuclear membrane
GO:0043234 IDA protein complex
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071782 IEA endoplasmic reticulum tubular network

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008680 kpnb1 karyopherin (importin) beta 1 protein_coding Danio_rerio
ENSG00000108424 KPNB1 karyopherin (importin) beta 1 protein_coding Homo_sapiens

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